Chloroflexus aggregans: Cagg_0076
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Entry
Cagg_0076 CDS
T00824
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cag
Chloroflexus aggregans
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cag03000
]
Cagg_0076
Transcription factors [BR:
cag03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cagg_0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
PAS_4
PAS_10
HTH_23
PAS
HTH_50
AAA_16
AAA_5
Xre-like-HTH
PAS_9
dCache_3
AAA_2
HTH_1
HTH_28
HTH_psq
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ACL23029
UniProt:
B8GC55
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Position
complement(104847..106724)
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AA seq
625 aa
AA seq
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MALPSLPPIQRSWMRCQARGLDPATPPQTGPVNIAAWSHLQTLARSSIEDLYQLSEHPGF
AVVICDEQATIIDVAGDSTILSLAQQSGIGYGISLLEEVAGTNAVDLALREALPYQTSGD
EHYCNWLQPFSLAAAPIFSPDGRALGALAILTRAEMQHPYALGMVIAAAQALHNQLRAER
LLNEANDQLSELYATLDSINEGLIFVGPNGEIRRLSRRVASILDINVRSAAGRPLVSVIP
PPPAISTALQELTTLDEQEVIWQTRSGPQAVMCSVRPVWDRSRRYLGSVITLRPAESVRQ
LVQQVVGARATFTFRDIIGQSEAMRQALRQARLAAAGRGPVLLRGEGGVGKEIFAQAIHN
ASNRAGGPFVRVACAAIPRQLLDSELFGVESSEHQAGRPGKLELAHGGVLYLEAIDALSF
DQQTNLLRAIEMGRVIRSGGKRPIPIDVRLIVTGHDLEQLVQEGRFRADLYARLSAFTID
IPPLRRRGDDVLLLANHMVQRLSEQLGRPIALAPDALAALHSYPWPGNVRELEVVLEQTV
QTTAKSVLTVHDLPPAIARHTTPLAMADNPRLAEAHALSERDAIVRAVRSAGGRLSRAAT
LLGISRATLWRKITRYQISRDELRA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccatcccttccgcctatccaacgctcatggatgcgctgccaggctcgcggt
cttgatccggcaaccccaccccaaacgggaccggtgaatatagcggcttggagccacctt
cagaccctcgctcgctcgtcgattgaagatctgtaccaattaagtgaacaccccggtttt
gccgtagtaatctgcgatgaacaggctaccatcattgatgttgccggcgatagcacgatt
cttagtctcgcgcaacaatctggcattggatacggtattagtctgctcgaagaagtagcc
ggcaccaatgccgttgatttagcgttgcgcgaggcactaccctaccagacgagtggtgat
gagcattattgcaattggttgcagccgtttagtttggcggcggcaccaatattcagccca
gatggccgagcgctcggagcactggcgattcttactcgtgccgagatgcaacacccctat
gccctagggatggttattgccgcagcccaggcgttgcacaaccagcttcgtgctgaacga
ttactcaacgaagcgaatgatcaactgagtgaactctacgcgaccctcgatagtattaat
gaagggttgatctttgtcggtcctaacggtgagattcgccgtttgagccggcgcgtcgcc
tccatcctcgatattaatgtgcgttcggcagccggtcgcccgttagtaagtgttattcca
ccacctccggcgatcagtactgcactgcaagaacttaccaccctcgatgaacaggaagtg
atctggcagacacgctctggcccacaagcggtgatgtgtagcgtccgaccggtatgggat
cggagccgacggtatctaggcagtgtgattacgttacgtccggcggaaagtgtgcgtcaa
ttggtgcaacaggttgttggtgctcgtgctacctttacgtttcgtgacattattggtcag
agtgaggcaatgcggcaagcgttacgccaggcacggctggccgcagccggtcgtggtccg
gtactccttcgtggcgaaggcggggtaggcaaagagattttcgcacaggctatccataac
gcaagtaaccgcgccggtgggccatttgtgcgcgtcgcttgtgctgccattccccgccaa
ttgctcgatagcgagctgtttggcgttgaaagctctgaacaccaagccggtcggccggga
aagctcgaattggctcatggcggggtactgtacctcgaagccatcgatgcgctctcgttc
gatcaacagacgaatctgctccgcgcaatcgagatggggcgtgtgatccggtcgggggga
aagcgtccgatccctatcgatgtgcgcctcattgtgaccggccacgatcttgaacagctt
gtgcaagaaggccggtttcgggccgatctctacgcacgactcagcgcctttactatcgat
atcccaccactgcgccggcgcggtgacgacgtgctgttactggccaaccatatggtgcag
cgcctcagcgaacagctcggtcgcccgatcgcactcgctcctgatgcactcgccgcactt
cactcctatccatggccgggaaatgtccgtgaattggaggttgtcctcgaacaaacggtg
caaacgacggctaagagtgtattgaccgttcacgatctgccaccggcaattgcccggcat
acgacaccactggcaatggccgataacccacgccttgctgaggcccatgctcttagtgaa
cgcgacgcaattgtacgggcagtacgtagtgccggcggacggctgagccgagctgctacc
ctacttgggattagccgggcaaccctctggcgcaagattactcgctatcagatttcacgt
gacgaattacgagcctga
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