Chloroflexus aggregans: Cagg_2716
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Entry
Cagg_2716 CDS
T00824
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
cag
Chloroflexus aggregans
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cagg_2716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cag03021
]
Cagg_2716
Transcription machinery [BR:
cag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cagg_2716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_15
Sigma70_r4_2
HTH_Crp_2
RecQ-1-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ACL25583
UniProt:
B8G577
LinkDB
All DBs
Position
complement(3336737..3337681)
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AA seq
314 aa
AA seq
DB search
MSNPTTIGRSASDTIVLYLNEIGAEPLLTFEQEQQLAQTIAQGRRAAERLTNEPSLHSTE
KKRLAAQVAAGEQARAQLINSNLRLVVSIARRYQGHGLTLLDLIQEGSIGLMRAVDKFDA
GRGLKFSTYATYWIRQSIGRAIADHSRTVRLPVHLGERLSRLARLRQELAQQLDREPTLE
ELANAAGLSVEQVERAEQAGLAPTSLDEAHTEDGGGALSEILTDPLQPTPFDEVSEGMLQ
ADVQAALSQLSPRERNILRLRYGLDGEPMHTLEQIGQRLRLTRERVRQLEYEALRKLRDP
SLYPQLQGYVNDTI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccccaccactattggtcgtagcgcatctgatacgattgtgctctatctgaat
gaaatcggtgcagagccgttactaaccttcgagcaagagcagcaattagcccagacgatt
gcccaagggcgacgtgccgccgaacgcttgaccaatgagccgtcgttgcacagcaccgaa
aagaagcggctcgctgcacaagttgctgccggtgagcaagcgcgcgcacaattgatcaat
tcaaacttgcgcttggtcgtgagtattgctcgccgctatcaaggccacggtctcaccctg
cttgatctgatccaagaggggagtatcggcctgatgcgcgcagttgataaatttgacgct
ggtcgtggcctgaaattttcgacctacgcgacctattggatccggcagagtattggacga
gcgattgccgaccatagccgtaccgtgcgtttgccggtacatttaggcgaacgactcagc
cggcttgcgcgcctacgccaagagctggcccaacaactcgaccgcgaaccgacgctggaa
gagttagcgaacgccgccggcctgagcgtcgagcaagtcgagcgggccgaacaagccgga
ctggcaccgacctctctggatgaagcgcacaccgaagatggcggcggcgcgttgtccgag
atactcaccgaccctctgcaaccaacgccgttcgatgaagtcagcgagggtatgttacag
gccgatgtacaagctgcccttagccagctctcgccgcgcgaacgcaacatcttgcgcctg
cgctacggcctcgacggcgagccaatgcacaccctcgaacagatcggccagcgcctgcgc
ctcacccgcgaacgggtgcgccagttagagtacgaggcgctgcgtaaactacgtgatccg
tcgctctatccacaattgcaggggtatgtaaacgatacaatttag
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