Capsicum annuum (peppers): 107839180
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Entry
107839180 CDS
T04646
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107839180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107839180
03041 Spliceosome [BR:
cann03041
]
107839180
03032 DNA replication proteins [BR:
cann03032
]
107839180
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107839180
Spliceosome [BR:
cann03041
]
Complex A
U1 snRNP components
Sm proteins
107839180
U2 snRNP components
107839180
Complex B
U1 snRNP components
107839180
U4/U6.U5 tri-snRNP components
107839180
Complex C
U2 snRNP components
107839180
DNA replication proteins [BR:
cann03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107839180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107839180
NCBI-ProteinID:
XP_016538051
LinkDB
All DBs
Position
8:complement(144622647..144626252)
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AA seq
284 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKEE
REDRRTLGLVLLRGEEVISMTVEGPPPPDESRVKATAAGSAVSGPGIGRAAGRGVPTGPM
VHAQPGLAGPVRGVGGPAPGMMQPQLSRPPMPQVSAPPINYPPPMMRPPGGGPPQMPPQG
MQMQRPGGPPPPMAPPPQFRPGGGPPQQFPPQFGQRPMVPPPPMMRGPPPPGAPPRPGMP
GGPPGQPPRPGMPPPPPGGQVPVYGPPRPGMPPPPNAPPQNQQQ
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagttcgaaaatgcttcaatacatcaattaccgtatgcgtgttact
atccaagatggtcgtcaactgatcggaaaattcatggcgttcgaccgacacatgaacctc
gtcctcggagactgtgaagagtttcggaagcttcctccgacgaaaggttcgaaagaagaa
cgtgaagatcggcgtacacttggtcttgtacttctccgtggtgaagaggttatttccatg
actgttgaaggtccaccacctcctgatgaatcgagagttaaggctactgctgcaggttct
gctgtttccgggcccggtattggtcgggctgcgggccgtggtgttcctaccggcccgatg
gttcatgctcaaccgggtcttgctgggcctgttcgtggtgttggcgggcctgctccgggg
atgatgcagcctcagctttctcggcctccaatgcctcaagtttctgctccacctattaat
tacccaccgccgatgatgaggccaccaggtggtgggccaccacaaatgccgccgcaaggt
atgcagatgcagaggcctggtggacctccgccacctatggcaccgccaccacagttcagg
ccgggtggtggtccaccacaacagtttccaccgcagtttggtcagcggcccatggttcct
ccgcctcctatgatgaggggtccaccaccacctggtgctccacctagaccaggaatgcct
ggtggtcctcctggtcaaccacctcgccctggtatgccaccaccacctccaggtggtcag
gttcctgtttatggacctcctcgtcctggtatgcctccaccgccaaatgctcctccacag
aatcagcagcagtag
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integrated database retrieval system
