Capsicum annuum (peppers): 107868448
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Entry
107868448 CDS
T04646
Name
(RefSeq) PH, RCC1 and FYVE domains-containing protein 1
Organism
cann
Capsicum annuum (peppers)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
BRX
FYVE
PH_12
BRX_N
TBCA
Not3
DUF4407
KASH_CCD
ATG16
DUF2408
DUF16
SHE3
DUF3450
AIP3
EzrA
DivIC
HALZ
V_ATPase_I
Csm1_N
Mcp5_PH
TMF_DNA_bd
FapA
Cep57_CLD_2
Seryl_tRNA_N
Golgin_A5
TMPIT
Motif
Other DBs
NCBI-GeneID:
107868448
NCBI-ProteinID:
XP_016570625
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Position
4:complement(1520529..1527986)
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AA seq
1072 aa
AA seq
DB search
MADPASYGNPDRDIDQGLIALKKGTQLIKYSRKGKPKFCPFRLSPDETTLIWYSRGSERN
LKLKTVSKIIPGQRTPVFKRFLRPEKEYLSFSLIYNNGERSLDLICKDKIEAEIWIAGLK
NLISTGQAHSRRTRSDITDLQNSQPYGGSIDFGQSISRDWTSADPYGGETSLSVRSSDVG
SERGNMQVRTSSDGFRISVSSTPSCSSGGLGPDDIESLGDVYVWGEIWCDGSLKDGTGNP
VPVKHDVLTPKPLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGVEKDFS
RPKLVEFLAVTNIDFVSCGEFHTCAVSTVGDLYTWGDGTHNAGLLGHGNDVSHWIPKRVS
GPLEGLQVLSVACGTWHSALATVNGKLFTFGDGTFGALGHGDRVTVPYPRDVQSLSGLKT
IKVACGVWHTAAIVEVTNHNCGNLPTRKLFTWGDGDKYRLGHGNKEPYLLPTCVSALIDY
NFHQLACGHSITVGLTTSGHVFMMGSNAHGQLGNPQADGKAPSLVQDKLVGEFVEEIACG
SSHVAVLTSRSEVYTWGRGANGRLGHGDTEDRNSPTLIEALKDRHVKNIACGSNYTASIC
IHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHCHGCSSKKALKAALAPTPGKPHRV
CDSCYMKLKKASEGNTSFFVKKFNSYHRPVEHSKFDRSEAKISRVLLSPTIEPIKYLEVK
STRPGMKSDNLSIVRASQVPSLLQLKDIAFPSSLSALQYALKPVVTAPSPPQPQPQPQPC
SSNSRPVSPYSRRPSPPRSPAPVFSRGVIDSLRKTNDVLHQEVSKLQNQIKNLKQKSDGQ
DAEIRKLKESSQESSKLVAGRASKCNAAVETMKSITTQLKEMTQELPTDISEGPAIKSIN
AQVESFLNTYANQVSEDNTSSQSDTSNSHQKPTHRNNVSEPVIRNDHWDAAGIPETPRNV
DGTARENHGQTAPESVSGSPNAPREGQKEVIEQFEPGVYVTLLQLTNGTKIFKRVRFSKR
RFAEQQAEEWWKENKDRLLKKYSPAKTNAATSTTDSSPASTVTPAQEDSEAS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctgctagttatggcaatcctgaccgcgatattgaccaggggctaattgcg
ttgaagaaaggaacacagctaattaagtatagccggaaggggaagccaaagttctgtcct
tttagactttctccggatgaaacaacgttgatttggtactcgcgtggatcagaaaggaat
ctaaagctaaaaacagtttcgaaaattattcctggacagagaactcctgtttttaaaaga
tttttgcggccggagaaggagtacttgtcattttcccttatatacaacaatggtgaaaga
tcattagatttgatctgcaaggacaagatcgaagcggagatttggattgctggactaaag
aatttaatttcaactgggcaagctcatagtagacgtactcggagtgatattactgattta
caaaattcccaaccatatggtggatcaatagatttcggccaaagtatttctcgggattgg
acttctgctgatccatatggtggtgaaacttccttgagtgtgcgaagctcagatgtgggg
tctgaacgtggaaatatgcaagtaagaacaagttcggatggtttccgtattagtgtctct
agcactccaagttgttcgagtgggggtttggggccagatgacatagaatcattaggtgat
gtttatgtgtggggagagatttggtgcgatggatcgttaaaagatgggaccgggaatcca
gttcctgttaaacatgatgtacttactcctaaacctttggaatcgaatgtggttcttgat
gttcatcaaattgcttgtggtgtacgacacgttgctcttgttacgaggcaaggagaggtt
ttcacttggggtgaagaatccgggggcaggttaggtcacggcgttgaaaaggactttagc
cgccctaaacttgtcgaatttctggcagttacaaatattgattttgtttcgtgtggcgag
tttcatacctgtgctgtgtctacggtgggcgatttatatacttggggtgatggaacacat
aacgctggacttcttgggcacggcaatgatgttagccactggataccgaagagagtttca
ggtccgttggaagggcttcaagttttatctgttgcatgcggtacctggcattcagcgttg
gcaactgttaatggaaaactattcacatttggcgatggaacatttggcgcgttaggtcat
ggggatcgtgtaactgtaccatacccgagggacgttcaatcacttagcggacttaagact
attaaagtcgcgtgtggtgtatggcacactgctgctatcgtggaagtcacgaatcacaac
tgtggaaacttgccaaccagaaagttattcacctggggagatggcgataagtatagatta
ggccacggaaataaagaaccttatctgcttccgacctgtgtctctgcacttatcgattac
aacttccatcagttagcatgtggacatagtataacagttggtcttaccacatcgggtcac
gtgttcatgatgggaagcaatgcacacggtcagcttggaaatccacaggctgatgggaag
gcgccttcgcttgtacaagataaattagtaggtgaatttgttgaagaaatagcatgtggc
tcgtcgcatgttgctgtccttacatcaagaagtgaagtctatacgtggggaagaggtgct
aacggaaggttaggtcacggtgacactgaagatcgcaacagtccgacattaattgaggcc
ttaaaagacaggcatgtgaagaacatagcatgtggatctaattacactgccagtatttgc
attcataagtgggtgtctggtgcagatcagtctgtttgttcaggttgtcgacaagcattt
gggtttacgcggaagaggcacaactgttataattgtggactagtgcattgtcacggttgc
agttcgaaaaaagcactgaaagcggcactcgctccaactccaggtaaaccacaccgcgtt
tgtgactcttgctacatgaaattgaaaaaagcttccgaaggaaatacctcatttttcgtt
aagaaattcaactcctatcatcgaccagtagagcatagtaagtttgataggagcgaggcg
aaaatatcaagagttttgctctcaccaacgatagaaccgattaagtacctcgaagtcaag
tctacaaggcctggtatgaaatcagataatctcagtatagtgagagcttcacaagttccc
tcacttttgcaattaaaagatattgcttttccgagttcacttagcgcgcttcaatatgcc
ttgaagcctgtcgtgacagcaccatctccgccccagccacaacctcaacctcagccttgt
tcgtccaactctagacctgtttcaccctactcgagaagaccaagtcctccacgctcgcct
gctcctgttttctcaaggggtgtcatcgatagtcttagaaagacaaacgacgtattgcac
caagaagtttccaaattgcaaaaccagatcaaaaacttaaagcagaaaagcgatggacaa
gatgctgaaattcgaaaattgaaggaaagttctcaagaatcatcgaagttagttgcaggg
agagcatccaagtgtaatgccgcggtggaaaccatgaagtctataactactcaactgaaa
gagatgacacaagaactgcctaccgatatctcggagggtccagcaattaaatccataaat
gctcaagttgaatcatttctcaatacgtatgcaaatcaagtatctgaagacaacacttct
tcgcaatcagacacatcgaatagtcatcagaagccaacacatagaaataatgtatcagaa
cctgtcattagaaatgatcactgggatgctgctggaatacctgaaactccacgtaatgtc
gatggaacagcacgtgaaaaccacggacaaacagctcctgaaagtgtctcggggtcacct
aatgctcccagagaaggacaaaaggaagttatcgaacaatttgaacctggcgtctatgtc
actctccttcaacttacaaatggcaccaagatctttaagcgcgttagattcagtaaacgg
aggtttgcagagcaacaagcagaagaatggtggaaggaaaacaaagatagactactgaaa
aagtacagccctgcaaagacaaatgccgcgacgtctactactgattcatcaccagcatca
acagtaacaccagcacaagaagatagcgaagcatcataa
DBGET
integrated database retrieval system