Collimonas arenae: LT85_3598
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Entry
LT85_3598 CDS
T03512
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
care
Collimonas arenae
Pathway
care00061
Fatty acid biosynthesis
care00071
Fatty acid degradation
care01100
Metabolic pathways
care01212
Fatty acid metabolism
care02024
Quorum sensing
Module
care_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LT85_3598
00071 Fatty acid degradation
LT85_3598
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT85_3598
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
care01004
]
LT85_3598
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
care04147
]
LT85_3598
Enzymes [BR:
care01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LT85_3598
Lipid biosynthesis proteins [BR:
care01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
LT85_3598
Exosome [BR:
care04147
]
Exosomal proteins
Exosomal proteins of breast milk
LT85_3598
Exosomal proteins of breast cancer cells
LT85_3598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AIY42756
UniProt:
A0A0A1FE75
LinkDB
All DBs
Position
complement(4069135..4070793)
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AA seq
552 aa
AA seq
DB search
MNEQKNSVQMMLQWAAAKPNASWLFQPILGQWKTTTWAQGSDQVRRMAATLKAMNWAPGS
RIGISGRNTAHWIMADLAITMAGHVSVGLYPKQASATTRYILEHSEAKAVFLGPMPDADD
FMAAIPSSVCTISFPYQEAPVGQLKWDELVAATAPMALEAYQAPPPEALMTLIYTSGTTG
NPKGVMLSYGNVLFAVYSIMNLVPSLGQECYFSYMPLAHAFERFAIALPSCYNGGEVHFL
ENVDKMGEQLAQVAPTRFFGVPLVYGRIQTAILHKMPQHKLDRLMAIPLLRTIIRRKIRV
AVGLQHVRFCLSGAAPIPAALLDWYKRNLGLVVLQGYAPTEASVYSSACLPDQNRIGSVG
KPPQNAGFKLSDDGEILFKHPGLMMGYYKDPESTRAAFTEDGYLRTGDKGRVDEDGYLYI
TGRIKDIFKTAKGKYVAPAPIECLLARDTDLENLLFIGSGMNQPVMAVTLTAAARGKPRA
EVEQGLIAEMAAVNTTLEPHEKIAKCVVLKDAWNIENGLMTPTMKVKRNEVEKRYAGLME
RELQIRSAVGWE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacaaaagaattcggtgcaaatgatgttgcaatgggcggctgcaaaacccaac
gcatcctggctgtttcaaccgattcttgggcagtggaaaaccacaacctgggcacaaggc
agcgatcaggtcaggcgcatggcggcaacgctgaaagccatgaactgggcacccggcagc
cgcatcggcatctctggccggaataccgcgcactggatcatggcggacctggcgattacc
atggccggtcacgtcagtgtcggcttgtatccgaagcaggcatctgccaccacccgttat
atcctcgagcatagcgaagccaaggcggtgtttctagggccgatgcctgatgcagacgat
tttatggccgcgattccgtcttcggtctgcaccatttcttttccctatcaggaagcgccg
gtggggcaactcaagtgggatgaactggttgcggccactgcgcccatggcgttggaagcc
tatcaggcgccgccgccagaggcgctaatgactctgatctatacctcgggcaccaccggc
aatccgaaaggcgtgatgctgagttacggcaatgtgctgtttgctgtctacagcatcatg
aacctggtgccgtccctgggccaggaatgctacttctcctatatgccgctggctcatgca
ttcgaacgttttgcgatcgcgttaccgagttgctataacggtggcgaagtgcattttctt
gagaatgtcgacaagatgggtgagcagttggcgcaggtcgcgccgactcgcttcttcggc
gtgccgctggtatatggccggatccagaccgccatcctgcacaagatgccgcagcataaa
cttgaccgcttgatggcaatccccttgctgcgtacgataatccggcgcaaaatccgggtc
gccgtcggtttgcagcatgtccgcttctgcctgtcgggagctgccccgataccggccgcg
ctgctggactggtacaaacgcaacctgggtttggtcgtattgcaaggctatgcgccgacc
gaagcctcggtctattccagcgcttgcctgccggaccagaaccgtatcggttccgtcggc
aaaccgccacagaacgccggcttcaagttatccgacgacggtgaaatcctgttcaagcat
ccgggcttgatgatgggttattacaaggatccggaaagcacccgggcggcgtttaccgag
gatggttatctccgtactggcgacaagggtagggtggacgaagacggttatctgtatatc
accggccggatcaaggatatttttaaaaccgccaagggaaaatatgtcgcgccagcaccc
atcgaatgtttgctggcccgtgatacggatctggaaaacctgctgttcattggcagcggc
atgaatcagccagtgatggcggtgaccttgaccgctgcggcgcgcggcaagccgcgcgcc
gaagtggaacagggtttgatcgccgagatggctgcggtcaatacgacgctggaaccacac
gaaaagatcgccaagtgcgtcgtgttgaaagatgcatggaacatagaaaacggcttgatg
acgccgaccatgaaagtcaaacggaacgaggtggagaagcgctacgccggactgatggag
cgggaactgcagatacgcagtgcggtcggatgggaatga
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