Clostridium botulinum A Hall: CLC_0024
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Entry
CLC_0024 CDS
T00575
Symbol
serS-1
Name
(RefSeq) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cbh
Clostridium botulinum A Hall
Pathway
cbh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CLC_0024 (serS-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbh01007
]
CLC_0024 (serS-1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbh03016
]
CLC_0024 (serS-1)
Enzymes [BR:
cbh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CLC_0024 (serS-1)
Amino acid related enzymes [BR:
cbh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CLC_0024 (serS-1)
Transfer RNA biogenesis [BR:
cbh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CLC_0024 (serS-1)
Prokaryotic type
CLC_0024 (serS-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NPV_P10
COG6_N
LRRFIP
KASH_CCD
TMF_TATA_bd
Cauli_AT
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
5399291
NCBI-ProteinID:
YP_001385977
UniProt:
A5HXR1
LinkDB
All DBs
Position
22357..23637
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AA seq
426 aa
AA seq
DB search
MLDLKRIRNNSNEIKESLNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNQVSSE
VPKLKKEGKDVSNIVAEMKNLSEEIKGFDTTLAKIDEKIQYIMLRIPNIPNPQVPDGDTD
EDNIEIRNWSEPTKFDFEPKAHWDIGSNLNILDFERAGKVTGSRFTFYKGLGARLERSLI
SYFLDTHTEKHGYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPVTN
LYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYEE
LEKLTNDAETVLKELGIPYRVVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNFED
FQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILENYQNEDGSVTIPEVLRPYMG
GKEAIK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaagaataagaaataattcaaatgaaataaaagaatcattaaacaat
agaggagaaaagtttgatgtaactgtaattgatgaagtcttaaaattagatgaagaaaga
agaaatattttagttaaagttgaggttttaaaaagtaagagaaatcaagtttcttctgaa
gttcctaaactaaaaaaagaaggaaaagatgtatctaatatagtagctgaaatgaaaaat
ttatcagaagaaataaaagggtttgatactactttagctaaaatagatgaaaaaatacaa
tatataatgcttagaatacctaatataccaaacccacaagttccagatggagacacagat
gaggataatatagaaataagaaattggtcagaaccaacaaaatttgattttgagcctaaa
gcacattgggatataggttcaaatttaaatattcttgattttgaaagagctggaaaagta
acaggatcaagatttactttttataaaggattaggagctagattagaaagatcattaata
tcttattttctagatactcatacagagaagcatggctacactgaaatattaccaccttat
atggtgaatagaacaagtatgataggaacaggacaattacctaaatttgaagaagatgct
tttaaaatttcagaggatgattacttcttaataccaactgcagaggttcctgtaactaat
ttatacagagatgaaatcttaaaaggtgatgaattaccattaaaacatgtagcttatagt
gcttgttttagatcagaagccggttcagcaggtagagatacaagaggtcttgttagacag
catcaattcaataaagtagagcttgttaaatttacaaaaccagaacagtcttatgaagaa
ttagaaaaattaactaatgatgctgaaacagtattaaaagagttaggtattccatatagg
gttgtaagaatatgtaaaggtgatttaggatttacagctgcattaaaatatgatttagaa
gtttggatgccaagttacaatagatatgttgaaatatcaagctgtagtaactttgaagac
ttccaagcaagacgtgctaatataagatataaagaagatgcaaaagcaaaaccacaatat
gttcatacattaaatggatcaggagttgctattggaagaactgttgcagctatacttgaa
aactatcaaaatgaagatggatcagttacaataccagaagtgttaagaccttatatggga
ggaaaagaagcaataaaatag
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