Clostridium botulinum Ba4: CLJ_B2991
Help
Entry
CLJ_B2991 CDS
T00895
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbi
Clostridium botulinum Ba4
Pathway
cbi03410
Base excision repair
cbi03430
Mismatch repair
cbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLJ_B2991 (recJ)
03430 Mismatch repair
CLJ_B2991 (recJ)
03440 Homologous recombination
CLJ_B2991 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbi03400
]
CLJ_B2991 (recJ)
DNA repair and recombination proteins [BR:
cbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CLJ_B2991 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CLJ_B2991 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CLJ_B2991 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
HTH_24
F_bP_aldolase
Motif
Other DBs
NCBI-ProteinID:
ACQ55098
UniProt:
A0A3F3A953
LinkDB
All DBs
Position
complement(2970566..2972347)
Genome browser
AA seq
593 aa
AA seq
DB search
MNKKWMLRRNKLNIRDIANKSGISETLCTVLVNREIYNLEDIKDFLEPSLEKLYNPLLMK
DMDKGTEIIKRSIIDKKKIAIYGDYDADGVTSTVILYIALKECEANVIYYIPDRETEGYG
MCTERVERLKAEGVEVIITCDNGIAALEQVERAKELGMTVVITDHHELPFIENEKEEREY
VVPKADAIINPKQKDCYYPFKMLCGAGIAFKFSKLLYEKLNMNPNKYKELLQFAAIGTIC
DVVDLKGENRIIAKLGLESINNTNNLGLRALIKETSLNEKNITSYNVGFIIGPCINATGR
LDTAALSVELFLAKDIKRAEELAKELRNLNTERQEITMEGVEEITYTIENSSLKNDKVLV
IYKENIHESIAGIVSGRIKDAYNRPTIVLTKGKEMPKGSGRSIDGYNLFEELMKCKEYIY
KFGGHPMAAGLTIEEKNIDKLREELNKNCNLKDEDFIPKIRIDKRLPLKEVNLELIDSLQ
CLEPFGKGNSSPILAEKNIKIEGIRILGKDQNTLKLTCRVEDTNKRIHAIAFGKVDEFKR
DLENIYEDENVENIITNPLMAGLKLDLIYYPMINEYNGNVYTQLRIIDYRING
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaaagtggatgttaagaagaaataaattgaatataagagatatagctaataaa
tcaggaataagtgagaccttatgtactgtattagttaatagagaaatatataacttagaa
gatataaaggattttttagagccctctttagaaaaactttataatcctttattgatgaaa
gatatggacaaaggtacagaaataataaaaagatcaataatagataaaaagaaaatagct
atttatggagattatgatgcagatggggttactagcaccgtaatattatatatagcttta
aaggaatgcgaagctaatgtgatttattatataccagatagagaaacagaagggtacggt
atgtgtacagaaagagttgaaagattaaaagcagagggcgtagaggttataattacttgt
gataatggtatagctgcgttagagcaagtagaacgagcaaaagaattaggtatgacggtg
gtaattacagaccatcatgaattaccttttatagaaaatgaaaaggaagaaagagaatat
gtagtaccaaaagcagatgctataataaatccaaaacaaaaggattgctattatcccttt
aaaatgctttgtggggcaggtatagcttttaagttttcaaaacttttatatgaaaaatta
aatatgaatcctaataaatataaagaattattacaatttgcagctataggaacaatatgt
gatgtagtggatttaaagggtgaaaatagaataatagctaaattgggattagaaagtata
aataacacaaataatctaggcttgagagcacttataaaagagacttcattaaatgagaaa
aatataacttcttataatgtaggatttataataggaccttgtataaatgctacaggaaga
ttagatacagcggctctttctgtggagctgtttttggctaaagatataaaaagggcagaa
gaactagcaaaagaattaagaaacttaaatactgagagacaagaaataacgatggaaggt
gtagaagaaataacatataccatagagaattcatcattaaaaaatgataaagtgttagtc
atttataaagaaaatatacatgaaagtatagcgggtatagtatcaggaagaataaaggat
gcatataatcgaccaacaatagttttaactaaaggcaaagaaatgcctaagggatctgga
agatctatagatggatataatctttttgaagaacttatgaaatgcaaggaatacatatat
aaatttgggggtcatccaatggctgctggtcttactatagaagaaaaaaacatagataaa
ctaagagaagaattaaataaaaattgcaatttaaaagatgaagactttatacctaaaata
agaatagataagagattacctctaaaagaagtgaatttagagctaatagatagcctacag
tgcttagaaccttttggtaaaggaaatagttcaccaatactagcagaaaaaaatataaaa
atagaaggaataagaatattaggtaaagatcaaaacacattaaaattaacttgtagagta
gaagatacaaataaaagaatacatgcaatagcctttggaaaagtggatgaatttaaaaga
gatttagaaaatatatatgaagatgaaaatgtggaaaatattataactaacccacttatg
gcaggtttaaaattagatctaatatattatccaatgattaatgagtataatggaaacgtg
tatacccaactaagaataatagattacagaataaatggataa
DBGET
integrated database retrieval system
