Clostridium butyricum: ATN24_09885
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Entry
ATN24_09885 CDS
T04197
Name
(GenBank) RNA-binding protein hfq
KO
K03666
host factor-I protein
Organism
cbut
Clostridium butyricum
Pathway
cbut02024
Quorum sensing
cbut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATN24_09885
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATN24_09885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbut03019
]
ATN24_09885
03036 Chromosome and associated proteins [BR:
cbut03036
]
ATN24_09885
Messenger RNA biogenesis [BR:
cbut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ATN24_09885
Chromosome and associated proteins [BR:
cbut03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ATN24_09885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-ProteinID:
ALP90436
UniProt:
A0A0A6PV01
LinkDB
All DBs
Position
1:complement(2195467..2195697)
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AA seq
76 aa
AA seq
DB search
MVNKTVNNIQDIFLNNARKNRTNLTVHLLNGFQIKGIVKGFDNFTVILECDENMMLIYKH
SISTITPEKPIPFINN
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
ttggtcaataaaacagttaataatattcaagatatttttctaaataatgcacgaaaaaat
agaactaatttaacagttcatttattaaatggttttcaaattaaagggattgtaaaagga
tttgataattttacagttatcttagaatgtgatgagaatatgatgttaatatataaacat
tcaatttcaacaataacacctgaaaagccaataccttttattaataattaa
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