Candidatus Symbiobacter mobilis: Cenrod_1508
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Entry
Cenrod_1508 CDS
T02877
Symbol
xseA-2
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Cenrod_1508 (xseA-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbx03400
]
Cenrod_1508 (xseA-2)
Enzymes [BR:
cbx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Cenrod_1508 (xseA-2)
DNA repair and recombination proteins [BR:
cbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Cenrod_1508 (xseA-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF6777
Motif
Other DBs
NCBI-ProteinID:
AGX87594
UniProt:
U5NBN8
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All DBs
Position
1662780..1663928
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AA seq
382 aa
AA seq
DB search
MFRRSASELGFAPRDGDVVEVDGRLSVYEPRGDLQLVVDRMVRCGAGSLFEEFLRRKAAL
DAEGLFDPARKRPVPRQPRCIGVVTSLAAAALRDVATTLHRRAPHIPVVLAPALVQGAGA
PAELCAALQALYAWGATPPRPGAAGEDSIPGASSFAIPVEVILLVRGGGSIEDLWAFNDE
ALARTIAASPVPVVSGVGHETDFTIADFVADARAATPTAAAELAASEHSAEHDILNRLSL
RLATAMQRRFERHAQRLDALVHALRSPAQRCEIERLRLATRAQALRVGVAHALHSHGNRL
ERKADQLAMASRLAQGAHRQRLEHAALRLDLLAPQHVLERGYAWLGDAQGTPITRCAQTH
PGQRLTATLCDGTVPIAVLAGP
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgttccggcgctctgcctccgaactgggctttgccccccgcgacggagacgtggtcgaa
gtcgatggccgactgagcgtatatgaaccacggggcgacctgcaactcgtcgtcgaccgc
atggtgcgctgcggggcgggttcgttattcgaggaatttttgcgacgcaaagccgctctc
gatgcggaaggactcttcgaccccgcccgcaaacgccccgtgccacggcagccgcgctgc
atcggcgtcgtaacctccctggccgccgcagcgttgcgcgatgtagccaccaccctgcat
cgccgtgcgccgcatatccccgtggtgctcgcaccggctttggtgcaaggcgcgggtgcc
ccggcggagctatgcgccgccctgcaagcgctgtatgcatggggggcaacgccaccccgg
cctggcgcggcaggggaagattcgatccctggcgccagctccttcgccatccctgtcgaa
gtcatcctgctggtacgcggtgggggttcgatcgaagacctatgggccttcaacgacgaa
gccctggcccgcaccatcgcagccagccctgtgcctgtggtgtccggggtcgggcatgaa
acggacttcacgatcgctgacttcgtagcagatgcccgcgcagccacaccgactgcggca
gcagaacttgccgccagcgaacacagcgccgaacacgacatcctgaaccggctctccctc
cggcttgccactgccatgcagcgccgcttcgaacgccatgcgcagcgcctcgacgcgctg
gtacatgcgttgcgcagcccggcgcaacggtgcgagatcgagcgcttgcggctcgccaca
cgcgcccaggctctgcgcgtcggcgtcgcacacgccctgcattcccatggcaaccgcctc
gaacgcaaggcagaccagcttgccatggcatcgcggcttgcccaaggcgcacaccggcaa
cggctggaacacgctgcattgcggctcgatctcctggcgccgcaacacgtcctggagcgc
ggctacgcatggcttggcgacgcgcagggaacgcccatcacgcgctgcgcgcaaacccac
cccggccaacgtctgaccgccaccttgtgcgacgggactgtgccgattgctgtgctggct
gggccgtag
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