Clostridium beijerinckii ATCC 35702: Cbs_0820
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Entry
Cbs_0820 CDS
T03415
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cbz
Clostridium beijerinckii ATCC 35702
Pathway
cbz03030
DNA replication
cbz03430
Mismatch repair
cbz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cbs_0820 (holA)
03430 Mismatch repair
Cbs_0820 (holA)
03440 Homologous recombination
Cbs_0820 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbz03032
]
Cbs_0820 (holA)
03400 DNA repair and recombination proteins [BR:
cbz03400
]
Cbs_0820 (holA)
Enzymes [BR:
cbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cbs_0820 (holA)
DNA replication proteins [BR:
cbz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cbs_0820 (holA)
DNA repair and recombination proteins [BR:
cbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cbs_0820 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP0268
Motif
Other DBs
NCBI-ProteinID:
AIU00303
LinkDB
All DBs
Position
998324..999358
Genome browser
AA seq
344 aa
AA seq
DB search
MINYEVYEQEIEKGNIKNGYIFCGLDEEFIKDGISLIIKKNIAEEFMDLNLIRIDGMNTS
FDAIMNACETMPFMGEKKVVVVYRSNFLQDKTDSSGTKIYNDIKSYISNLPPYTVLIMYY
LLNDKRDRPNKNKKLATIGKSLTIVYCDKLKRDKYLKKVSEVFKEKGKQIGRTELSYFCE
KVYNNFDIIKREADKLISYCGEREIKKEDIDILISKSSEDDTFDLVELIATKKIDKAIDT
MKEILYKSDQHMLIISAIQKHFLRLYEIKIKLSNGKKVDDFMSDYRLPQFVCEKLIMQTN
KFTEKQLSELIKLCVNTETKLKSTGIDKNMEMEFLLINTLTVKK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgattaattacgaagtttatgagcaagagattgaaaaaggaaatataaaaaatggatat
atattttgtgggttagatgaagaatttattaaagatggaataagtctgattataaaaaag
aatatagctgaagaatttatggatcttaatttaataaggatagatggaatgaatacaagt
tttgatgctatcatgaatgcgtgtgaaacaatgccattcatgggagaaaaaaaagttgtg
gttgtttataggtctaattttttacaggacaaaactgattcgtcaggaactaaaatatac
aatgatattaagagctatatatcaaatttacctccatatacagtattaataatgtattat
ttattgaatgataagagagatagaccaaataaaaataagaaattagctactattggtaaa
tcattaacaatagtatattgtgataaattaaaaagggacaaatatttaaagaaagtatcg
gaagtatttaaagagaagggaaaacaaattggaagaactgagttatcttatttctgtgag
aaagtttataataattttgacattataaaaagagaagctgacaagcttatatcgtattgt
ggtgaaagagagataaaaaaagaggatattgatatacttatttcaaaatcaagtgaggat
gatacttttgatttagttgaattaatagctaccaaaaaaattgataaagctatagatact
atgaaggaaattttatataaatcagaccagcatatgctgataataagtgctattcaaaag
catttcttgagattatatgagataaagataaaacttagcaatggaaaaaaagtagatgat
tttatgtcagactataggttgccgcagtttgtttgtgaaaaattaataatgcagacaaat
aaattcacagaaaagcagttatcagagttaattaagctttgcgttaatacagaaacaaag
ttaaaatcaactggaatagataagaatatggaaatggaattccttttaataaatacactt
acagttaaaaaataa
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