Castor canadensis (American beaver): 109690014
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Entry
109690014 CDS
T04791
Symbol
Rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03030
DNA replication
ccan03420
Nucleotide excision repair
ccan03430
Mismatch repair
ccan03440
Homologous recombination
ccan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109690014 (Rpa1)
03420 Nucleotide excision repair
109690014 (Rpa1)
03430 Mismatch repair
109690014 (Rpa1)
03440 Homologous recombination
109690014 (Rpa1)
03460 Fanconi anemia pathway
109690014 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109690014 (Rpa1)
03032 DNA replication proteins [BR:
ccan03032
]
109690014 (Rpa1)
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109690014 (Rpa1)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109690014 (Rpa1)
DNA replication proteins [BR:
ccan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109690014 (Rpa1)
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109690014 (Rpa1)
MMR (mismatch excision repair)
109690014 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
109690014 (Rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
109690014
NCBI-ProteinID:
XP_020024704
UniProt:
A0A250Y3Q8
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEQRLSSNCICQINRFIVNTLKDGRRVVILMDLEVLKSAEAVGIKIGNPVPYNE
GHGQQQVVPSPGSAASPPASKPQQQNGSSGMGSTVSKTFGAPKIFGKPGGTGPSQPAGTQ
FKVVPIASLTPYQSKWTICARITNKSQVRTWSNSRGEGKLFSIELVDESGEIRATAFNEQ
VDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLPCEDGHHLPSVQFD
FTGIGDLENKSKDSLVDIIGICKSYEDVTKITVKSNNREVAKRNIYLMDMSGKVVTATLW
GDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQA
LDGVSISDIRSGGIGGSNTNWKTLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYQAC
PTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILG
QNTAYLGELKEKNEQAFEEVFQNANFRSFMFRIRVKLETYNDESRIKATVMDVKPVDYRD
YGRRLIMNIRRNATM
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccacttgagcgagggggccattgcggccataatgcaacagggagatacatcc
ataaaacccatcctccaagtcattaatatccgtcctattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaacc
cagttgaaccctcttgttgaggaacaacgattgtccagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggacggagagtagttattttgatggatttagaa
gttttgaagtcagctgaagcagttggaataaagattggcaatccagtgccctataatgaa
ggtcatgggcagcagcaagtagttccttctccaggctcagcagccagtccaccagccagc
aagccccagcaacagaatgggagctcgggaatgggttccactgtatccaagacttttggt
gctccaaagatatttggaaaacctggtgggactggaccatcacagcctgctgggacacag
ttcaaagtggtaccaatcgccagccttaccccttaccagtccaagtggactatttgtgct
cggatcaccaacaaaagtcaggtccgtacctggagcaattcccgaggggaagggaagctt
ttctctatagaactcgttgatgaaagtggtgaaatcagagctacagctttcaatgagcaa
gtggacaagttcttccctcttattgaagtgaacaaggtgtattatttctcaaaaggtacc
ctgaagattgctaacaaacagttctcagctgttaaaaatgactatgagatgaccttcaat
aatgagacttctgtcctgccatgtgaagatggtcatcatttaccttcagttcagtttgat
ttcacggggattggcgacctagagaacaagtctaaagactcgcttgtagacataattggg
atctgcaagagctatgaagatgtcaccaaaatcacagtgaagtctaacaacagagaagtc
gctaagagaaatatatatttgatggacatgtcagggaaagtggtgactgctactttatgg
ggagatgatgctgacaagtttgatggttctagacagcctgtgatggccatcaaaggagcc
agggtttctgattttggtggacggagtctctcagtcctgtcttccagtactatcattgtt
aatcctgacattccagaggcctataagcttcgcggatggtttgactcagaaggacaagcc
ttagatggtgtttccatctctgatataaggagtggaggaataggagggagcaacaccaac
tggaaaactttatatgaggttaaatcggagaacctgggccagggcgacaaggcggactac
ttcagctctgtggcaacagtggtgtatcttcgcaaagagaactgtatgtaccaggcttgc
ccaactcaggactgcaataagaaagtgattgaccagcagaatggattataccgctgtgag
aagtgcgaccgtgaatttcctaatttcaagtaccgcatgatcttgtcagcaaatattgca
gattttcaagagaatcagtgggtaacttgtttccaggagtctgcggaagccatccttgga
cagaacaccgcgtatcttggggagttaaaagagaagaacgagcaggcatttgaagaagtc
ttccagaatgccaactttcgatctttcatgttcagaatcagggtcaaactggagacctat
aatgatgagtctcgtattaaggccaccgtgatggacgtgaagcccgtggactacagagac
tatggcagaaggctgatcatgaatatcaggaggaacgccacgatgtga
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integrated database retrieval system