KEGG   Castor canadensis (American beaver): 109690014
Entry
109690014         CDS       T04791                                 
Symbol
Rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
  KO
K07466  replication factor A1
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan03030  DNA replication
ccan03420  Nucleotide excision repair
ccan03430  Mismatch repair
ccan03440  Homologous recombination
ccan03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109690014 (Rpa1)
   03420 Nucleotide excision repair
    109690014 (Rpa1)
   03430 Mismatch repair
    109690014 (Rpa1)
   03440 Homologous recombination
    109690014 (Rpa1)
   03460 Fanconi anemia pathway
    109690014 (Rpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccan03000]
    109690014 (Rpa1)
   03032 DNA replication proteins [BR:ccan03032]
    109690014 (Rpa1)
   03400 DNA repair and recombination proteins [BR:ccan03400]
    109690014 (Rpa1)
Transcription factors [BR:ccan03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    109690014 (Rpa1)
DNA replication proteins [BR:ccan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    109690014 (Rpa1)
DNA repair and recombination proteins [BR:ccan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     109690014 (Rpa1)
   MMR (mismatch excision repair)
     109690014 (Rpa1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     109690014 (Rpa1)
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 IBR
Other DBs
NCBI-GeneID: 109690014
NCBI-ProteinID: XP_020024704
UniProt: A0A250Y3Q8
LinkDB
Position
Unknown
AA seq 615 aa
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEQRLSSNCICQINRFIVNTLKDGRRVVILMDLEVLKSAEAVGIKIGNPVPYNE
GHGQQQVVPSPGSAASPPASKPQQQNGSSGMGSTVSKTFGAPKIFGKPGGTGPSQPAGTQ
FKVVPIASLTPYQSKWTICARITNKSQVRTWSNSRGEGKLFSIELVDESGEIRATAFNEQ
VDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLPCEDGHHLPSVQFD
FTGIGDLENKSKDSLVDIIGICKSYEDVTKITVKSNNREVAKRNIYLMDMSGKVVTATLW
GDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQA
LDGVSISDIRSGGIGGSNTNWKTLYEVKSENLGQGDKADYFSSVATVVYLRKENCMYQAC
PTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFQENQWVTCFQESAEAILG
QNTAYLGELKEKNEQAFEEVFQNANFRSFMFRIRVKLETYNDESRIKATVMDVKPVDYRD
YGRRLIMNIRRNATM
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggtcggccacttgagcgagggggccattgcggccataatgcaacagggagatacatcc
ataaaacccatcctccaagtcattaatatccgtcctattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaacc
cagttgaaccctcttgttgaggaacaacgattgtccagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggacggagagtagttattttgatggatttagaa
gttttgaagtcagctgaagcagttggaataaagattggcaatccagtgccctataatgaa
ggtcatgggcagcagcaagtagttccttctccaggctcagcagccagtccaccagccagc
aagccccagcaacagaatgggagctcgggaatgggttccactgtatccaagacttttggt
gctccaaagatatttggaaaacctggtgggactggaccatcacagcctgctgggacacag
ttcaaagtggtaccaatcgccagccttaccccttaccagtccaagtggactatttgtgct
cggatcaccaacaaaagtcaggtccgtacctggagcaattcccgaggggaagggaagctt
ttctctatagaactcgttgatgaaagtggtgaaatcagagctacagctttcaatgagcaa
gtggacaagttcttccctcttattgaagtgaacaaggtgtattatttctcaaaaggtacc
ctgaagattgctaacaaacagttctcagctgttaaaaatgactatgagatgaccttcaat
aatgagacttctgtcctgccatgtgaagatggtcatcatttaccttcagttcagtttgat
ttcacggggattggcgacctagagaacaagtctaaagactcgcttgtagacataattggg
atctgcaagagctatgaagatgtcaccaaaatcacagtgaagtctaacaacagagaagtc
gctaagagaaatatatatttgatggacatgtcagggaaagtggtgactgctactttatgg
ggagatgatgctgacaagtttgatggttctagacagcctgtgatggccatcaaaggagcc
agggtttctgattttggtggacggagtctctcagtcctgtcttccagtactatcattgtt
aatcctgacattccagaggcctataagcttcgcggatggtttgactcagaaggacaagcc
ttagatggtgtttccatctctgatataaggagtggaggaataggagggagcaacaccaac
tggaaaactttatatgaggttaaatcggagaacctgggccagggcgacaaggcggactac
ttcagctctgtggcaacagtggtgtatcttcgcaaagagaactgtatgtaccaggcttgc
ccaactcaggactgcaataagaaagtgattgaccagcagaatggattataccgctgtgag
aagtgcgaccgtgaatttcctaatttcaagtaccgcatgatcttgtcagcaaatattgca
gattttcaagagaatcagtgggtaacttgtttccaggagtctgcggaagccatccttgga
cagaacaccgcgtatcttggggagttaaaagagaagaacgagcaggcatttgaagaagtc
ttccagaatgccaactttcgatctttcatgttcagaatcagggtcaaactggagacctat
aatgatgagtctcgtattaaggccaccgtgatggacgtgaagcccgtggactacagagac
tatggcagaaggctgatcatgaatatcaggaggaacgccacgatgtga

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