Cyprinus carpio (common carp): 109112302
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Entry
109112302 CDS
T05134
Name
(RefSeq) testis-expressed sequence 10 protein homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109112302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
109112302
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
109112302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
MMS19_C
HEAT
XMAP215_CLASP_TOG
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
109112302
NCBI-ProteinID:
XP_018980809
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All DBs
Position
38:complement(16888923..16906712)
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AA seq
892 aa
AA seq
DB search
MKTKKQKRQGDFQKIQLKIGKKKPKADNATNVSFRSKAIHLPEQLKHADSGPTSHRQLDI
KDLLSKLHHINSNIKQGALVGLRELLSAQPTLIELHASAVLSEVAALFTDKDGSVRAAAV
RLLRFIAQCISAERVAPFFPLLSAHLTCAMTHISEAIQEDALKVLDVLLEHYPGLLSQKH
TVLLTNFLELISQKRKAGTGQDKSGKGSFSLTISTNRSVTAQQWRLTVLLRLGSFLQAVV
EERPLEEGVTSMIGLGMWAGEKGSVTSVDVSWEEHVFGKGRIQVFENSGAVPTPHSTYRL
RPDSKAGAGMNKELCSAETVQGFAGTLVPLMLEIWVEAAGGDHVQTDSGHLLSAEAMALM
FQILTILQLLRRLTPQRDQQDILDAWFRNSYLTDFKHHFMKNFPYGLLEVARHKKKADGK
RIRQQVAAGTVAGGNVEPLALNVTLCQVMVTLSLRGQDHVEAEDADWLGPIRGFIRETLS
SGGKLSSKHLAALLEVVWRMIVTQRSRVVTDDLLQAVFVQYQQRNLAVNVRTLLLRFFSQ
LYIQEHQNHPHIARSRILARWLASLPVQLVQLGSRNPQLSAQLLETIHPAAARANKDLLQ
SLQKNACSIYDPQEGCVVVLPVESQKRLVQILHFLPTFPAELLACLSQVCNTGRVSASLA
TMLIRTIHLRYEGYDTSPCTNAVLKSASSVPLWDIRDLVSHGEVCHCLDTLGSRAQCFDV
IQNAIIKNLCGLVVVPDCVCAAILRCVPRLLDVNFLPSDTLLHFLSDCCLSMLSLLLQLE
QSARIRDAMWEACFAALSMVPRLLRLVLQSLRVCDLCEEELPVLAQILSLLLQHTQLRNH
MMANASLLQHIIQDLTHFYGGETREQWLTDLLYCYRVTLSGHRANMGMRDIY
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaaaaagcaaaaaaggcaaggcgatttccagaagattcagctaaagattggc
aaaaagaagccaaaagcagacaatgcaacaaacgtcagcttcagatcaaaagctatccat
ttaccagagcagctaaagcatgcggattcaggaccaacatcgcacaggcagctcgacatt
aaggatctgttgtccaagctacaccacatcaacagtaacataaagcagggagctctggtg
ggtttgcgggagttgctgtcagctcagcctactctgattgagctgcatgcatcagcggtg
ctctctgaggtggcagcactcttcactgataaagatggctctgtgcgagcagctgcagtg
cgtctgctgcgtttcatcgctcagtgcatctccgccgaacgtgtagctcccttcttccct
ctgctcagcgcacacctcacttgtgccatgactcacatctcagaagcaatccaggaagat
gctctcaaggtcctggatgtgctgctggagcactatcctggacttctttctcagaagcat
acggttcttctgacaaattttctagagctcatatcccagaagcgaaaagctggaacaggg
caggataaatctgggaaagggagcttttctctgactatcagcacgaatcgctctgtaaca
gcacaacaatggagactcactgtgctgctcaggttggggagttttctgcaggcagttgtt
gaggaaagacctctggaggaaggtgtgaccagcatgattggccttggaatgtgggctgga
gagaaaggctcggtgacatctgtggatgtgagttgggaggagcatgtctttggcaagggc
aggatccaagtgtttgaaaattctggagccgttcccaccccacattccacttatcggctg
aggccggactctaaggcaggggctggaatgaataaggaactctgttcggctgagacggtg
cagggctttgcaggaaccctggtgcctctgatgctggagatctgggtggaggcggcaggt
ggagatcatgtgcagacagacagtggccacctgctctcagcagaggccatggctcttatg
ttccagatcctcaccatactgcagttactgagaagacttaccccacagagagatcaacag
gacatactggacgcctggttccggaattcatacctgacagatttcaaacaccacttcatg
aagaacttcccctatggcctgctggaggtggcaagacacaagaagaaagctgatggaaag
aggattaggcagcaggtagcagctggaacggttgctggcggcaatgtggaaccgttggcc
ctaaacgtgacattgtgccaagttatggtgacactcagtcttaggggccaggatcacgta
gaagccgaagatgctgactggctcggaccaatcaggggatttattagggagacattgtcc
agtgggggcaagctgagctcaaagcacctggcagccttactagaggtggtgtggaggatg
attgtcacccagcgcagccgcgtggtgacagatgatctcctgcaggctgtgtttgtgcag
taccagcagaggaacctggctgtgaacgtccgcactttgctgctgcgctttttcagtcag
ctctacattcaagagcatcagaaccaccctcatattgcccggagcaggattctggcgcgt
tggctggcgtcactgccggtgcagttggttcagctgggcagcaggaatcctcagctctca
gcacaactgctggagacgatccatccagctgccgcgagggccaataaagaccttctgcag
agtcttcagaaaaatgcctgcagtatttatgatccacaggagggctgtgtggtggtgtta
cctgtggagtcccagaagaggctggttcagattctccatttcctgccaacgtttcccgca
gagcttctggcatgtctcagtcaggtctgcaacactgggagagtgtcggctagcctggcc
accatgctaatacgcaccatacacctgaggtatgagggttatgacacatcaccgtgcact
aatgcagtcctaaagtctgcttccagtgttccgctctgggacatcagagatctagtttcc
catggggaggtgtgccactgcctggacactctaggatctcgtgcacagtgttttgatgtg
atacagaacgccatcattaagaatctgtgtggactcgtggtggtgccagactgtgtttgt
gcagcgattttaaggtgtgttccccggttactggatgtcaacttcctgcccagcgacaca
ctcctccacttcctgtctgactgttgcttgagcatgctcagtctgctgctacaactggag
cagagcgcccgcatcagggatgccatgtgggaggcatgttttgccgcgttgagcatggta
ccgaggctgctgcgattggtcttgcagtctttacgtgtgtgtgacctttgcgaggaggag
ctccccgtgttggcacagatcttgtcattacttcttcagcatactcaattacgcaaccac
atgatggccaacgccagtctactgcaacatatcatacaggacttaacgcatttctatggt
ggagagactcgagagcagtggctgactgacctgttgtactgctacagagtcacgctgtct
ggtcaccgggccaacatgggcatgagggacatctattaa
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