Clostridium cellulovorans: Clocel_2032
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Entry
Clocel_2032 CDS
T01294
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ccb
Clostridium cellulovorans
Pathway
ccb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Clocel_2032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccb03400
]
Clocel_2032
DNA repair and recombination proteins [BR:
ccb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Clocel_2032
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ADL51775
UniProt:
D9SM44
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Position
2433739..2436444
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AA seq
901 aa
AA seq
DB search
MALTPMMQQYLQIKEENPQCILFFRLGDFYEMFFEDAKIASRELELVLTGRDCGLEERAP
MCGIPYHAANVYISKLVSRGYKVGICEQLEDPSVAKGIVKRGIVKVYTPGTYIEGNFLED
RKNNYIMSIYFSVDKFYIAFSDISTGEFSSSYFNYDVPMLLSEISKYNPSEIIIHEEIKE
EVIAAIKERFSVTFTNENLDFYMSGYKENVESYFKDYNIDEKPIGLAYSINSIIRYIKET
QKADLSHINTLNIYEIEDFLSIDINTRKNLELTETQRDKTKKGSLLWVLDKTSTAMGARE
LRKWIDQPLINKNAIELRLEAVAELVSNLSLQEELKVLLKDIYDIERLVGKVSSKSVNAK
ELLSIKSSISKIPAIKTLLKQCTSSYLQEIYNNLDELSDIEELLEKSIDESPAITLKEGN
LIKEGYNSEIDQLKVAKKDGKLWLSELEAREKETTGIKSLKVSFNKVFGYYIEVTKTNLN
MVPEHRYIRKQTLANCERYITDELKKMEDIILGAEEKLISLEYDVFVEVRELVLKEVLRM
QQSARLIATIDCLNSLAIVALENNYTRPAIDVSGIINIKEGRHPVVEKLLPTGNFISNSI
SLDREENQLLIITGPNMGGKSTYMRQCALITIMAQIGSFVPAESATIGICDKVFTRIGAS
DDLAGGKSTFMVEMWEVANILNNATNNSLVLLDEVGRGTSTYDGLSIAWAVIEFLTTNKN
VKCKTLFATHYHELTKLEAEFSGVKNYSVGVKKIGEEIIFLHKIVKGAADESYGIEVARL
AGLPQAVLDRSKEILMKLEEENLEEKDITKRTSEVKLVEAAVVIEKVEKNIEVIETPNVE
IEKLPGKEVAKKQEKPVQMDFYEITRRSFVDEISRLDLMNMTPLDAMTKLNELIKKSKDL
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaccccaatgatgcaacagtatttacagataaaagaagaaaatccacagtgt
attctattttttagattaggcgatttctacgaaatgtttttcgaggatgccaaaattgca
tcaagagaacttgaattagttctaaccggaagagattgcggattagaagaacgtgctcca
atgtgtggtattccatatcatgctgctaatgtctacataagtaagctagtgtcaagagga
tataaagttggtatttgtgagcaacttgaagacccaagtgtggctaaaggaattgtaaaa
aggggtattgttaaggtatatactccaggaacttatatcgagggtaatttccttgaagat
agaaaaaataattatattatgagtatatatttttcagtagataaattttatatagctttt
tctgatatttctacaggtgaatttagtagttcatattttaattatgatgtacctatgtta
ttaagcgagatatcaaagtataatccttcagaaataataattcatgaggaaataaaagaa
gaagtaattgcggcaataaaagaaagattttctgtaacatttactaatgagaatttagat
ttttacatgtcaggttataaagaaaatgtagagagttattttaaggattataatatagat
gaaaaaccaattggcttggcttatagtattaattcgataataagatatattaaggaaact
caaaaggcagatttaagccatattaatactttgaatatatatgaaatagaggattttctt
tcgatagatatcaatactagaaaaaatttggaactcacagaaactcaaagagataaaacg
aaaaaaggttctttactgtgggtattagacaagactagtactgctatgggagctagagaa
cttagaaaatggattgatcagcctttaataaataaaaatgctatagaactaaggttagag
gcagttgctgaattagtatctaacttatcgcttcaagaagaacttaaagtcttattaaaa
gatatttacgatattgaaaggcttgtaggaaaagtatcttctaaaagtgttaatgcaaaa
gagttattatcaataaaatcgtctataagtaagattccagctataaaaactctgctaaaa
caatgtacttcctcgtatcttcaagaaatatataataatttagatgaattatcagatatc
gaagaattgttagaaaaatcaattgatgaaagtcctgctattacattaaaagaaggtaac
cttattaaagaaggttataattcggaaattgatcaattaaaagttgctaaaaaagatggt
aagctatggctttcagagcttgaagcaagggaaaaagagactacaggaataaaatcttta
aaggtaagctttaataaggtttttggttactacattgaagtaaccaagacaaatttaaat
atggttccagagcataggtatataagaaaacaaacccttgctaattgtgaaagatatata
actgatgagcttaaaaagatggaggatatcatattaggtgctgaagaaaagcttatctca
ctggagtacgatgtatttgttgaagttagagaactagttttaaaagaagtcttaagaatg
cagcaatcagcgcgattaattgctaccatagattgtttaaattctctagctattgttgca
ttagagaataactatacaaggccagcaattgatgtcagtggtattattaatataaaagag
ggaagacatccagttgttgaaaaacttcttcctacaggaaattttataagtaattcaatt
tcattagatagagaagaaaatcaacttctgataataacagggcctaatatgggcggtaaa
tcaacatatatgagacaatgtgctcttataactattatggcgcagataggcagttttgtt
cctgctgaaagtgctactataggaatatgtgataaggtgtttacaagaataggggcatct
gatgatttagctggtggtaaaagtactttcatggtagaaatgtgggaagtagcaaatatt
ttaaataacgctaccaataatagcttagtgcttttagacgaagttggaagaggcacaagt
acttatgatggtttaagcattgcttgggcagtgatagaattcttaacaacaaacaagaat
gtaaaatgtaaaactttattcgccacacattatcatgaacttacaaagcttgaagcagag
tttagcggtgttaaaaattattctgtaggtgtaaaaaagataggtgaagagattatattt
ctccacaaaatagtaaaaggtgcggctgatgaatcttatggtatagaagtagcaagacta
gcgggacttccacaagcagtacttgatagatcaaaagaaattcttatgaaattagaggaa
gaaaacttagaagaaaaagatatcactaagagaacttcagaagttaaattggtagaagct
gcggttgttatagagaaagttgaaaagaacattgaagtaatagaaacacctaatgttgaa
attgaaaaactacctggaaaagaggtagcaaaaaaacaagagaaaccagttcagatggat
ttttatgaaataacaagaaggtcttttgtagatgaaataagtagattggatttaatgaat
atgacaccattggatgctatgacaaagctaaatgaacttataaagaaatcgaaggatctt
ttatag
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