Campylobacter coli RM1875: YSQ_08285
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Entry
YSQ_08285 CDS
T03164
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf00730
Thiamine metabolism
ccf00900
Terpenoid backbone biosynthesis
ccf01100
Metabolic pathways
ccf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
YSQ_08285
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
YSQ_08285
Enzymes [BR:
ccf01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
YSQ_08285
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
DUF5053
PFOR_II
SpoIISA_toxin
Motif
Other DBs
NCBI-ProteinID:
AHK73922
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Position
complement(1552329..1554206)
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AA seq
625 aa
AA seq
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MNEIIKKDYQFAYTKEELEKLNLTQLEDLAARIREKIIDVVSKNGGHLSSNLGAVELTIA
MHTVFDNGIDPLIFDVSHQSYTHKLLSGKENVFESLRQFGGLSGYTKPNDGDYFVAGHSS
TSISLAVGACKAIALKGEKRTPVALIGDGALSAGMAYEALNELGDSKFPCVVILNDNEMS
ISKPIGAISKYLSQAMATQFYQNFKKRVAKMLDALPDSATYMAKRFEESFKLITPGLLFE
ELGLEYIGPIDGHNLSEVISALKQAKAMQKPCIVHAQTLKGKGYSLAEGKNAKWHGVSAF
DVDSGESIKKPDAKNSATEIFSKALFDLATKYKNIVGITAAMPSGTGLEKLIEHYPDRFW
DVGIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQVIHDCAIMNLNVVFAMDRAGIV
GEDGETHQGAFDVSFLAPLPNLTLIAPRDELMMKNIMEYAYTHEGCLAFRYPRGSFILDE
EFNPTKIELGKAQWLVKNQSNIAFLGYGQGVGKAWKVLRKLQDEGQNANLIDLIFAKPLD
KLLLKELAKQSQIWFVFSENARIGGVASLLESFVQKNDLKIKIVSFEYEDSFIEHGKTNE
VEKALKLDIDSLVQRVKINWVDNIL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaataattaaaaaagattatcaatttgcttatactaaagaagagttagaaaag
ctaaatttaacccagcttgaagatttagcggctcgcattagagaaaaaattattgatgta
gtaagtaaaaatggagggcatttaagctccaatttgggagcagttgagcttactatagct
atgcacacggtatttgataatgggatagatcctcttatatttgatgtatcccatcaatct
tacacacataagcttttaagtggaaaagaaaatgtttttgagtctttgcgccaatttggt
gggcttagtgggtataccaagcctaatgatggggattattttgtagcaggacactcaagt
acttctatttctttagctgtaggagcctgtaaggccatagcactaaaaggcgaaaaacgc
actcctgtagctttgataggcgatggagctctaagtgcaggtatggcttatgaggccttg
aatgaattaggagattctaaatttccttgtgtagttatcttaaatgataatgaaatgagt
atttcaaaacccataggtgcaatttcaaaatacctctctcaagccatggcaacgcagttt
tatcaaaatttcaaaaaacgcgtggctaaaatgttagatgcattacctgattctgctact
tatatggctaagcgttttgaagaaagctttaaattaataaccccaggactcttatttgaa
gaattgggtcttgaatatataggacctattgatggacataatttaagtgaggttatttct
gcattaaaacaagcaaaggctatgcaaaaaccttgtattgttcatgcgcaaactttaaaa
ggaaaaggttatagtttagccgaaggaaaaaatgctaaatggcatggggtcagtgctttt
gatgtagatagtggagagagtattaaaaagcctgatgctaaaaattctgcaacagaaatt
ttttctaaggcattgtttgatttggctacaaaatataaaaatatagtcggtatcactgct
gctatgccaagtggaacaggacttgaaaagcttatagagcattatcctgatcgtttttgg
gatgtgggtattgctgagcagcacgctgttacttctatggcggctatggctaaagaagga
tttaaaccttttattgctatatacagcacttttttacaacgcgcttacgatcaagttatc
catgattgtgcgattatgaatttaaatgtggtttttgctatggatagggcaggtatagta
ggagaagatggagaaacccaccaaggagcttttgatgtaagttttttagctcccttgcct
aatttaacccttatagctccaagagatgagcttatgatgaaaaatattatggagtatgct
tatacccatgagggatgtttggcttttcgttatcctagaggatcttttattttagatgag
gaatttaaccctaccaagatagaacttggaaaggcgcaatggcttgtaaaaaatcaaagc
aatatcgcttttttaggttatggacaaggggtgggtaaggcttggaaggttttaagaaaa
ttgcaagatgaggggcaaaatgctaatttgattgatttgatttttgctaaacccttagat
aaactacttttaaaagagttagcaaaacagagtcaaatttggtttgtttttagcgaaaat
gcaagaataggtggcgtagcgagtttattagagagctttgtacagaagaatgatttaaaa
attaaaattgtttcttttgaatatgaagatagttttattgagcacggcaaaaccaatgaa
gtagaaaaagctttaaaacttgacattgatagtttggtgcaaagggtaaaaataaattgg
gtcgataacatcctttaa
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