Corynebacterium casei: CCASEI_10625
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Entry
CCASEI_10625 CDS
T03041
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccg
Corynebacterium casei
Pathway
ccg03420
Nucleotide excision repair
ccg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCASEI_10625
03430 Mismatch repair
CCASEI_10625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccg03400
]
CCASEI_10625
Enzymes [BR:
ccg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCASEI_10625
DNA repair and recombination proteins [BR:
ccg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCASEI_10625
MMR (mismatch excision repair)
Other MMR factors
CCASEI_10625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHI20680
LinkDB
All DBs
Position
complement(2311480..2313558)
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AA seq
692 aa
AA seq
DB search
MSSFELDLEALDDDQRAAATAPRGPVCILAGAGTGKTRTITYRIAHMVDQGFVSPQRVLA
VTFTSKAAGEMRDRLMSMGVTGVQARTFHAAALRQLKYFWPQVAGDLPWRLVDNKFPIVS
RAVRNVGMDPTKETVRDILSEIEWAKSSLISADGYVDALKAHDRIAPKDPQKVAKVYQRY
EEFKSQPDGMLLDFDDLLIHVAGALENAPAVAEEFRQQYRTFVVDEYQDVTPLQQRVLNA
WLGERDDLTVVGDANQTIYSFTGASPDFLLDFSRTYDNATVVKLQRDYRSTPQVTDLANT
VIEKAVGRAAGTRLRLEGMREPGPVPKFQAYESEEIEAKEVAGEILTLLNQGVAASEIAI
LYRTNFQSAVFEEALADAGIVYQVRGGDGFFHRQEIVEATRALHRAARRSDLPNDPVAIA
KAAFVEIGLSDNEPEGAQARERWQSLSALVDLISTIVRDNPGIDLPGVIMDLQRRASNKQ
APTMEGVTLSTLHAAKGLEWDAVFLVGLTEKLLPINQAIKAQDDRGDDEAIEEERRLFYV
GITRARIHLLCSWALAKTTGSRASRQRTRFLDGVVPELGDSSAHSSRVSRPKRCRVCQGY
LNAPADKVLGRHETCESLADEEVFSALRQWRARVSKDIGKPAYVVFTDATLLSISEALPS
DKNGLLSISGVGPRKLDEYGDEVLEVIRGVHS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcctttgagttagatttggaggcgctggatgatgaccagcgcgctgctgcaacc
gcaccgcgcggcccggtctgtattttggcgggtgctggcacgggtaagacccgcaccatt
acgtaccgcattgcgcacatggtggaccaaggctttgtgtccccacagcgggtactagcc
gtgacgtttacctccaaagccgcgggtgagatgcgtgaccgcttgatgtccatgggtgtc
acgggcgtgcaagcccggaccttccacgctgcggcattgcggcagttgaagtatttctgg
ccgcaggtagcaggggatctgccgtggcgtttggtggataacaagtttcctatcgtctcc
cgcgcggtacgcaacgtaggtatggatccaaccaaggaaaccgtgcgcgatatcttgagc
gaaattgagtgggcgaagtcttctctgatttccgccgacggctacgtcgatgcactcaaa
gcgcacgatcgtattgcgccgaaggatccgcagaaggtggcgaaggtctaccagcgctat
gaagagttcaagtctcagcccgatggcatgctgctggactttgatgacctgctcatccac
gtggctggtgcattagaaaatgcaccagcggtagcagaagagtttcgccagcagtaccgc
accttcgttgtagatgagtaccaggacgtcactcccctgcagcagcgggtgctaaacgcc
tggttgggggagcgcgatgatttaaccgtggtgggtgatgccaatcagaccatttactca
tttaccggtgcatcaccagatttcttgctggatttctcgcgtacctatgacaacgccacc
gtggtgaaactgcaacgcgactaccgctccacgccacaggtcacagacctggctaacacc
gtcattgaaaaggccgtgggccgtgccgccggtacgcgcctgcgcttggagggcatgcgt
gagcccggccccgtgccgaagttccaagcctatgaatctgaagagattgaagccaaggaa
gtcgcaggtgagattctcaccctgctcaatcaaggcgttgcggcaagtgagattgccatt
ttgtaccgcaccaatttccagtcagcggtctttgaagaagcactcgcggatgccggaatc
gtgtaccaagttcgcggtggtgatggtttcttccaccgccaagaaatcgtggaagcaacc
cgggcacttcatcgcgcggcacggcgttcagatctgccgaatgacccagtcgccattgcc
aaggccgcttttgtggaaattggtctatcggacaatgagcctgagggtgcacaagcccgc
gaacgttggcagtcactcagtgccctggtggatctaatttccaccatcgtgcgtgataac
cctggcattgacttacccggtgtcatcatggatctgcagcgccgcgccagcaacaagcag
gcacccaccatggaaggtgtcacgttgtctacgctgcacgcagcgaagggcttggaatgg
gacgccgtcttcctagttggcctgactgaaaagctgctgcccatcaatcaagccatcaag
gctcaagatgaccgcggtgatgatgaggcgattgaagaagagcgccgcttgttctatgtc
ggcattacccgcgcgcgcatccacctgctgtgctcctgggccttggctaagaccaccggt
tctcgtgcttcgcgtcagcgcacgcgcttcctcgacggcgtggtgcctgagctgggagat
tcttccgcgcacagctcccgtgtctcgcgccccaagcgctgccgtgtctgccagggctac
ctgaacgcgccggccgataaggtgctgggacgccatgagacctgcgaatcattggcagat
gaagaagtcttcagtgctctgcgccaatggcgcgcacgggtatccaaagacattggcaaa
cccgcctacgtggtcttcaccgacgccaccttgctctcaatatccgaggcactcccgtcc
gataagaacgggttgctgtccatctccggggtgggcccgcgcaaactcgatgaatacggc
gacgaagtcctcgaagtcatccgcggcgtgcactcttag
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