Coprinopsis cinerea: CC1G_03774
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Entry
CC1G_03774 CDS
T01275
Name
(RefSeq) ROK1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cci
Coprinopsis cinerea
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cci03009
]
CC1G_03774
Enzymes [BR:
cci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CC1G_03774
Ribosome biogenesis [BR:
cci03009
]
Eukaryotic type
90S particles
Helicases
CC1G_03774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
6005406
NCBI-ProteinID:
XP_001828980
UniProt:
A8N267
LinkDB
All DBs
Position
1
AA seq
574 aa
AA seq
DB search
MEAFQLLSRGGLRFDKNRFKSEVGLFEQNQKPKPTSKATQTNGNDLPAELDFFKYAEGGK
GKENEKTKRKSSEKTDERERKRPKIADEDVEMDDMSSDDDVEEGTSSANAQNVPKHRIST
KGLNPPSQALRFEELKERYSLPPQLFNNLAKNGYHTPTAIQSAGIPVLLESRDLAAISPT
GTGKTLAYLLPLFARLGAPLHQTHDQSAGKGVRAVVVAPTRELAHQIYNECLKLAQGRKW
RITLFSKATASTLATKEVRDKTDIIVSTPLRLVAAVQEGKFELENVRYLVLDEADRLLDT
EFLEQTEELVASCTHSRLQKAIFSATLPAGVEKIAMDMLQDPIRLVVGLKDTPLPLISQS
LTYVADDGSKLPSLLTYLAQPYNPPVLVFTSSQPRATSLAEELLLNNIKNVDCLHAGMTN
KEREDVITRMRKGETWILITTEVMARGMDFKGVREVINYDFPTSVQSYVHRIGRTGRAGR
EGKAVTFFTNEDAPFLKIIANVILQSGSQVPEWILKLPKPSKIKRRLMGKIKRPEIVNNA
RRLGRREAIKKRDMIAASKRRKAKEASVPIASEP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggaggcttttcagctgctatccagaggcggcctgcgtttcgacaagaacagattcaag
tcggaagtaggactgttcgagcaaaaccagaaacccaagccaacctcgaaggccacccaa
accaatggaaatgatctaccggccgagcttgactttttcaagtatgcagagggtgggaag
ggaaaggaaaacgagaagacgaaacgaaagtcgtcggagaaaacggacgagagggagagg
aaacggcccaagattgcagacgaggatgtggagatggacgacatgtcttcagacgatgat
gttgaagaaggaacctcctcagccaatgctcagaacgtaccaaagcacagaatatcaacc
aaaggtctaaacccgccttcacaggcgctccgattcgaagaattgaaggaacgctactcg
ctacccccacagctattcaacaacctggcaaagaatggttaccataccccaactgccatc
caatcagcaggaatacccgtccttctagaatctcgcgatttggctgccatttctccaaca
ggtactggcaaaactctcgcatatctcctgcctctatttgcacgactcggtgctccactt
catcaaacacacgaccagtcggctgggaagggtgttcgggcagttgtggttgcaccaacg
cgtgaacttgctcaccagatatacaacgagtgcctcaaacttgctcagggccggaaatgg
agaatcaccctgttcagcaaagcaacagcaagcactctggcaaccaaagaagttcgcgat
aaaactgacattattgttagtacacctttaaggctggtcgctgctgttcaagagggaaag
tttgaattagaaaacgtccgatacttggtcctcgacgaagctgatcgcttactggatacg
gaatttctcgaacaaactgaggagctcgttgcttcctgcacgcatagccgactccagaag
gccatattcagtgccactttacctgcaggagtggagaagatcgccatggacatgctacaa
gatccaatcaggctagtcgtgggactaaaggatacaccactaccgctgatctcgcagtct
ctcacttacgttgcggacgacggttccaagttgcccagtttgctcacctaccttgcccag
ccttacaacccacctgtcctggtctttacctcatcacaacctcgagcgacgtccttagca
gaggagttgcttcttaacaacattaaaaacgtcgattgtctacatgctgggatgaccaac
aaagaacgcgaggatgtcattacgcgcatgcgcaagggagagacatggatattgatcacc
acagaggtcatggcaaggggtatggacttcaagggcgtgcgagaggtcatcaactacgat
ttccctaccagcgtccaaagttacgtccatcgaattggtcgaacagggcgagctggtcgt
gaggggaaggcagtcacgttcttcacgaacgaggatgccccgtttctgaaaatcatcgcc
aatgtcatcctccaatccgggtcgcaagtgcccgaatggatactgaaacttccaaaacca
tccaagattaaacggcgattgatgggcaagataaaacgcccagaaatcgtgaataatgct
agaaggcttgggcgaagagaagctatcaagaaaagggacatgatcgcagccagcaagcgc
cgaaaggcgaaagaagcctctgtgcctattgcttcggagccctaa
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