KEGG T01275: CC1G

Coprinopsis cinerea: CC1G_04531

Entry

CC1G_04531 CDS T01275

Definition

pre-mRNA-splicing factor rse1

Orthology

K12830

splicing factor 3B subunit 3

Organism

cci Coprinopsis cinerea

Pathway

cci03040

Spliceosome

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:cci03040]

SSDB

Motif

Pfam:

CPSF_A MMS1_N

Other DBs

NCBI-GI:

299751161

NCBI-GeneID:

6006536

UniProt:

A8N5F3

Position

AA seq 1205 aa
MHLYNYTLQPSSAIVQAAVGNFSGLRQQEILVSNGTRLELLQVDNDSGKLSTVAGADVFG
SIRSLAAFRLTGGSKDYAIVGSDSGRIVILEYDPKTNVFNKLHQETYGKSGTRRIVPGQY
LATDPRGRSVMIAAMENSKLVYVLNRDVATNLTISSPLGAHRASTIVHDVVGVDVGFDNP
VYAALEVDYSQSDQDPTGNALRRAEKLLTYYELDLGLNHVVRKWSEPTDPRANLLVQVPG
GQSTNGATHDGPSGVLVCCENHIIYQHGDAPSHRVPIPRRQDPVADPNQDVIIVAAVMHK
MKTEDGDVFKATVDHEDGVVSSLKIKYFETVPVASNLCILKQGLLFVASEFGNHHLYRFC
KLGDDDDQPEFSSSSYPSYGMAEPEQPLPRASFDPRPMENLMLIDELSSLNPVLDAKILK
PSLDSEAPKIFAACGRGPASSFKILSHGLEVDEMASSELPGFLAPHSLWSTKRMQTDHYD
NLLVMSFQNATIVLSIGESMEEVKDSGFLTSMPTLAVQQIGENGLIQVHTHGIRHLVDSQ
VNEWKVPQGQTIVAANTNRRQVVVALSSAEIVYFELDQEGQLNEYQDMKAMGSTVLALGL
GEVPEGRLRFPYLAVGCEDQTVRVMSLDPDSTLETISLQALTAPPSSICIAYMLDASINK
VQRSMFVNIGLANGVLLRTVLDGTNGQLTDTRTRFLGTKPVRLLRVKLKGEDAILAISSR
VWLNYSHQQKMEFTPLACETPECASSFTGESCPEGIISIAKNTLSISTVSKLGMKLKQES
VPLAFTPRKFVTHPGNRFFYLIESDQRTLSEEEEKKKLADLNISRDDHPILQLPAKIFGR
TRASAGHWASRIHIFDPMEAKTVATLPLKANEAAFSIAVVPFASTGGEYHLVVGTAMHHL
VTPPQASASYLKVYKIVNEGTGLELLHETPIQDSELPRALLAFQGRLLAGVGKALRIYDL
GKKKLLRKAETKSPTAIVSLATQGSRIVIGDMQESTLFAVYKEAENRLLIFGDDTQPRWV
SAMTMVDYNTVAVGDKFGNIFVNRLDSTISDQVDEDPTGAGILHEKATLNGAPHKTKMLA
HFHVGDIITSIHKVSLVVGGREVLLYTGLQGTIGILVPLTSKEDIEFLTMLEQHIRNEQG
SLVGRDHLSWRGYYVPVKAVIDGDLCETYGGLSSSKQSAIASELDRTVGDVLKKLDQMRV
ASSGF

NT seq 3618 nt +upstreamnt +downstreamnt
atgcacctgtacaactacactcttcaaccgtcttcagcgatagtccaggctgctgttggc
aatttttctggtctccgtcagcaagagatcttggtttccaacggcactcgtctggaactg
ctgcaagtcgacaacgactcgggaaagttgtcgacagtcgccggagcagatgtctttgga
tccataaggtctcttgcggcattcaggctcactggtggaagtaaagactatgccattgtc
ggatcggactcggggcggatcgtaattcttgagtatgaccccaaaaccaacgttttcaac
aaattacaccaggaaacatatggaaagtccggcacgcgaaggatagtgccgggccaatac
ctcgcaacggatcctcgaggacgaagcgttatgattgcagcaatggagaattcgaaactc
gtctatgtccttaatcgcgacgtggccactaacctcacaatttcttcacctttgggagct
cacagagcctcgacaattgtccacgatgttgttggtgttgatgtaggattcgataaccca
gtgtacgcggcgttagaggtggattattcacaatctgaccaagatcctacaggaaatgcg
cttagaagggctgagaagctgttaacctactacgaactggatctgggcttgaaccacgtg
gttcgaaagtggtctgaaccaaccgaccctagggcaaaccttcttgtccaggttccaggt
ggccagtctaccaatggggcgacgcacgacggaccgtcgggtgtcctggtttgctgcgaa
aaccatatcatctaccagcacggcgatgccccttcccatcgtgttccaatccctcgccgc
caggacccagtcgcggacccgaaccaggacgtaatcatcgtcgcagccgtgatgcataaa
atgaagaccgaagacggtgatgtattcaaggctacagttgaccacgaggacggtgtggtg
tcgtcactcaagatcaagtactttgaaacagtccctgtggcttcaaacttatgcattctc
aagcaaggactcttgttcgtcgcatcagaatttggcaaccatcatttgtatcgattctgc
aaactcggagacgacgatgaccagcccgagttttcttcatcctcgtacccttcctatggc
atggctgaaccggagcaacctttgcctcgcgcttccttcgacccacggcccatggaaaac
ctgatgttaatcgacgagttgtcgtcactaaacccagtccttgatgccaaaattctaaag
ccgtccctagactcggaagcgcccaagatttttgcggcgtgcggacgtggtccagctagt
tctttcaaaatcttgagtcacgggctggaggtggacgaaatggcttcctccgagctacct
ggttttctggcgccccattcgttgtggtcaaccaagcgaatgcaaacagaccattacgat
aacctcttagtcatgtcttttcaaaacgccaccatcgttttgagtattggtgaaagcatg
gaggaagtcaaagactccggttttctaaccagtatgccgactttggcagtgcagcaaatc
ggcgaaaatggtcttattcaggttcacacccacggtatcaggcatctagtcgactctcaa
gtaaacgaatggaaggtcccacagggtcaaacaatagttgcagccaacacgaaccgccgc
caagtcgttgttgcactcagttctgctgagatcgtatacttcgagttagaccaggagggc
caactcaacgaataccaggatatgaaggcgatggggagcactgtccttgcgctaggccta
ggcgaagtacccgaaggaaggttgcgttttccctacctggctgttgggtgtgaagaccaa
acagtaagggtgatgtcgctggatcctgacagcaccctggaaactatcagtctacaagca
ctgaccgcacctccgtcatcgatatgcattgcctacatgctggacgcgagcatcaacaaa
gtccagcggagtatgtttgtcaacatcggtttagctaacggcgtcctcctccgaacagta
ctggacggtaccaatggacagctgacggacactaggacaaggttcctgggtaccaagcca
gtccgactacttcgtgtaaagctgaagggagaagacgccattttagccatctcatcgaga
gtatggctgaattactcccaccagcagaagatggagttcactcctttggcatgcgaaacc
cctgaatgtgcctcgtcgttcactggagagtcgtgtcctgaaggcatcatatctattgcc
aagaatactctatcgatttcaaccgtcagcaagctcggaatgaagctcaaacaggagtct
gtccctctagctttcacccctagaaagtttgtcacccatccgggtaaccggttcttctat
ttgatagaaagtgatcaaaggacactgagcgaggaggaagagaagaagaaactcgctgat
ttgaacatatcccgggatgaccaccccattcttcaactccctgccaagatttttgggagg
accagagcatcagctggccactgggcgtcccgcatacatatcttcgaccctatggaggca
aaaacagtagcgacacttcctctgaaagcgaatgaagctgcattctccattgccgtggtc
ccctttgcttcaacggggggagagtaccacctggtcgtaggcactgcaatgcaccatttg
gtcactccaccgcaagcatcagcctcttatttgaaagtttacaagattgtcaatgaagga
acgggtcttgaacttttgcatgagacgccaatccaggatagcgagttaccacgcgcgttg
ctggcttttcaagggcgactgctcgctggcgtcggaaaggcccttcgaatctacgacctc
gggaagaagaagcttcttcgcaaagcggaaaccaagtcccccactgccattgtatccctt
gccactcagggttctcgaatcgtcattggagacatgcaagaatcaacactgtttgcggtt
tacaaggaagcggaaaataggttgctcatcttcggggacgacactcaaccgcgatgggta
tccgcaatgaccatggtcgactacaacaccgtcgctgtgggagacaagttcggcaacatc
tttgtcaaccgcctcgattcgacaatctctgatcaagtggacgaagacccaaccggcgcg
ggaattcttcacgaaaaagcaactcttaatggcgccccacataaaaccaagatgctcgcc
cactttcacgtaggggacatcatcacttcaattcacaaggtttccttggttgtcggcgga
cgcgaagtgctcctttatactggattacaggggacgatcgggatactggtcccattgacg
tctaaagaggatatcgagttcctaaccatgctggaacaacatattcgcaacgaacaaggc
agccttgtcgggagggatcatttgagttggcggggatactacgtgccggtgaaagcggta
attgatggcgacctatgcgaaacatacggcgggttgtccagctcgaaacagagcgcaatt
gcatcggaattggatcgcacggttggagacgttttgaagaagttagaccagatgagggta
gcgtccagtggcttctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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