Acetivibrio clariflavus: Clocl_3387
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Entry
Clocl_3387 CDS
T01661
Name
(GenBank) ABC-type bacteriocin transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
ccl
Acetivibrio clariflavus
Pathway
ccl02010
ABC transporters
ccl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Clocl_3387
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clocl_3387
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccl01002
]
Clocl_3387
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccl02000
]
Clocl_3387
Peptidases and inhibitors [BR:
ccl01002
]
Cysteine peptidases
Family C39
Clocl_3387
Transporters [BR:
ccl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Clocl_3387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_22
ABC_ATPase
nSTAND3
AAA
AAA_29
RsgA_GTPase
TsaE
MalF_N_TM
MobB
AAA_5
Rad17
AAA_7
DUF87
BetaGal_gal-bd
AAA_16
NACHT
Roc
Motif
Other DBs
NCBI-ProteinID:
AEV69885
UniProt:
G8LXG7
LinkDB
All DBs
Position
complement(3985555..3987780)
Genome browser
AA seq
741 aa
AA seq
DB search
MFRKYYCIKQHDITDCGAACLATISRQYGLRIPITKIRETAGTDRQGTNVYGLIKAAEQL
GFTAKAVRGDKEAFFSEFPLPAIAHVVVDNSLLHYVVIHKITKKEVIVADPAKGVVKYTP
EEFFMIWTGILILLVPSAQFKKGNETRGIFSRFFGLLAPQKRLIINIFFASLIYTVLGIL
GSFYYKFMMDDILPNNLSKTLHIVSIGIILLNVFKILLNAFRSHLLLYLSQKLDISLILG
YYNHVLQLPMNFFGTRKVGEIVSRFMDASKVREAISGATLTIMIDTLMAIAGGIILYSQS
AYLFAIAFIMVIAYAIIVFSFNKPIRDINRKQMEDSAQLTSYLVESLNGIETIKSFNAER
KANIETEKKFIRLLKSIFKGGWISNLQTSLTDFVATIGGVVILWVGAYRVIKGDMTVGQL
LSFNALLIYFLDPIKNLINLQPMMQTAIVASDRLGEILDLEIEKSENEDKKITPKSLKGR
IEFKDVDFRYGTRQLVLKNINLTINSGEKIAFVGESGSGKTTLVKLLLNLYKWEKGEILI
NGYNLKDINMNYLREKIAYISQDIFLFSGTIYENLTLGIENADMETVIEAAKMAKAHDFI
NELPLRYETMLEENGSNLSGGQKQRLAIARALLKKPDILIMDEATSNLDSITEKAIEKTI
NEHTQGITTLIIAHRLSTIMRCDKIYVMDKGEFVESGTHQELIDKKGVYYRLWKEQLSEA
SESFNPLAEAVSETAATREVK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgttcagaaagtattattgcataaaacaacatgatataacagactgtggggcagcatgt
cttgctacaataagtagacaatatggcttaagaattcctataacaaaaattcgtgagact
gctggaaccgatagacaggggacaaatgtatatggtttaattaaggccgctgaacagcta
ggttttactgcgaaggctgttcgaggagataaagaagcttttttttcagaatttccatta
cccgctatagctcatgtagttgttgataatagtcttttgcactatgtagttatacataag
ataacaaaaaaggaagtaattgtagctgatccggcaaaaggtgtggtaaaatatacacct
gaagagttctttatgatatggacaggcattttgatattgcttgtgccttcagcgcagttt
aagaaagggaatgagacaagaggaatattttcacgcttttttggtttgttagctcctcaa
aaaagactgataattaatattttttttgcatcactaatttatacagtattagggatttta
gggtcgttttactataaatttatgatggatgacatattgcctaataatctttcaaagaca
cttcatattgtgtcgattggaatcatccttctaaatgtatttaaaatattactaaatgct
ttcagatcacatctgctattatatctgagtcaaaaactggatatttctttgatacttgga
tactataaccatgtactgcagctgccgatgaacttttttggaactcgaaaagttggagaa
atagtttcaaggtttatggatgcatcaaaagtgagagaagctatatcaggggctacgctt
actataatgattgatacattaatggctattgcaggtggtattatactgtattctcaaagt
gcatatctatttgctatcgcatttataatggttatagcttatgcaattatagtgttttcg
tttaataaacctatacgggatattaatagaaaacagatggaggatagtgcccagcttaca
tcttatctggttgaatctttgaatggtatcgaaactataaaatcttttaatgctgaaaga
aaggctaatattgaaactgaaaagaaatttataagattattgaaaagtatatttaaaggc
ggttggataagcaatctgcaaacttcattaactgactttgttgccactattggaggcgta
gtaatactctgggtgggtgcatatagagttatcaagggagatatgacagttggacagttg
ctgtcttttaatgcactgcttatatattttcttgacccgataaaaaacttaattaattta
cagccaatgatgcagacggcaattgtcgcttcggacaggttgggagaaatactggatctt
gaaattgaaaaaagtgagaacgaggataagaagattacaccaaagtctttaaagggacgt
attgagtttaaggatgttgactttagatatggaaccaggcaattagtgctaaaaaatatt
aatctaacaattaatagtggtgaaaaaattgcttttgttggagaaagcggttccggtaaa
acaacgttggtaaagttgttgttaaacctttataaatgggaaaaaggagaaatccttata
aatggatataacttaaaagatataaatatgaattatctgcgcgaaaaaatagcctatatt
tctcaggatatattcctattcagcggaacaatttatgaaaatctgacacttggtatagaa
aatgcagacatggaaactgttatagaagcagcaaaaatggcaaaagcccatgattttata
aatgaattgccattacgttatgagactatgttggaagagaatggatcaaacctttcaggg
ggacaaaaacaaaggttagctatagcaagagcgctgctaaagaaaccggatattcttatc
atggatgaggcaaccagtaatcttgattcaattacagaaaaggcgattgaaaaaactata
aatgaacatacacagggaattactacattgattattgcacataggctatctactattatg
aggtgtgataaaatctatgttatggacaaaggtgagtttgttgaaagcggaacacatcag
gagttgattgacaagaaaggtgtttattacagactgtggaaagagcagttatcagaagcg
tcagaatcttttaacccattagcagaggcagtttctgaaacggcagcaacaagggaggtg
aaataa
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