Campylobacter coli RM5611: YSU_01635
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Entry
YSU_01635 CDS
T03167
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccoi
Campylobacter coli RM5611
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoi03016
]
YSU_01635
Enzymes [BR:
ccoi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
YSU_01635
Transfer RNA biogenesis [BR:
ccoi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YSU_01635
Prokaryotic type
YSU_01635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHK74591
LinkDB
All DBs
Position
323331..324449
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AA seq
372 aa
AA seq
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MNLEEENTIFKPLYSLKHSSINAYFSKNSDDFVVRERPLYEFSGKGEHLILHINKKDLST
NEALRILSELSGVKMRDFGYAGLKDKQGSTFQYLSMPKKFESFLANFSHPKLKILETFIH
ENKLRIGHLKGNSFFIRLKKVLPSDALKLEQALINLDKQGFANYFGYQRFGKFGDNYKEG
LEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELSYFANDFTEKELAQIYSISKEEA
KELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAELERFKARDISAMGLLIGAKAYEASQ
GLALNLENEIFKDALEFKAKMQGSRRFMWSYLEDVKWRYDEQKAHFCMEFFLQKGSYATV
VLEEILHKNLFE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaggaagagaacaccatttttaagcctttatatagtttaaaacacagttct
attaatgcgtattttagtaaaaatagcgatgattttgtagtgcgtgaaaggcctttgtat
gaatttagtggcaagggcgaacatcttatcttgcatatcaataaaaaagatttaagcact
aatgaagctttaagaattttaagcgaattaagcggggttaagatgcgtgattttggctat
gctggacttaaagacaagcaaggctctacttttcaatatctttctatgcctaaaaaattc
gagagttttttggctaatttttctcatcctaagcttaaaattttagaaacttttattcac
gaaaataaattaagaataggccatttaaaaggaaattctttttttatacgcttaaaaaaa
gttttacctagtgatgctttaaaattagagcaggctttgataaatttagataaacagggg
tttgcaaattattttggttatcaacgctttggaaaatttggggacaattacaaagaaggg
cttgaaattttacgtggtaaaaagatgaaaaatgtcaaaatgaaggaatttttaatctct
gcttttcaaagcgagctttttaatcgttatttgagtaaaagagtggaattatcgtatttt
gcaaatgattttaccgaaaaagaattggcacaaatttatagcatctccaaagaagaagct
aaagaacttaaaaaacaagagcagttttttaagcttttaaaaggcgaggttttggggcat
tatccttttggaaaatgctttttatgcgaggatttaagtgctgaacttgaacgttttaag
gcaagagatatcagtgctatgggacttttaatcggtgctaaagcttatgaggctagtcaa
ggactggctttaaatttggaaaatgaaatttttaaagacgctttggaatttaaagctaaa
atgcaaggctcaagacgctttatgtggtcgtatttagaagatgttaaatggcgttatgat
gagcaaaaagcccatttttgcatggagtttttcttgcaaaaaggctcttatgctaccgtg
gttttagaagagattttacataaaaatttgtttgaatga
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