Chondrus crispus (carragheen): CHC_T00002202001
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Entry
CHC_T00002202001 CDS
T02916
Name
(RefSeq) hypothetical protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
Hint
DUF3035
PT-HINT
Motif
Other DBs
NCBI-GeneID:
17321217
NCBI-ProteinID:
XP_005713469
UniProt:
R7Q842
LinkDB
All DBs
AA seq
1025 aa
AA seq
DB search
MTLRPIIILLLALLAAAAAQDGPLPPSAADDVPDAVVPDPRPTILGLLASDPDQFSVLAL
AALAVPDLTEALGDPNRRLTVFAPTNAAFAALTNKLSPGAGVDAADPEGILFALMGALPG
PLPGRSPGEVLTTILSYHLLAFAAPFQELENDGTAETVQGTLLRFRDGRVVDRDPSRRNP
RPDPRNVFTQNGWVHVIDTVLLPFNLETALAPLTPDGPDPIPIEEAEDVPDAILLDPRPT
ILGFVESRPDSFGILARAVGTVDSLVKALDDPNSRFTVFAPTDEAFTALANQLVPGADLN
PADKDAVVEALVSAIAPLADVEAAANSTIESILGYHALPFAAPFQELEDMSSAETVQGDA
LRFADGLVIDADESRENPVADPRNFFPQNGWVHVIDLVLLPFDLDAVLGPSEPEMPEEGQ
PIDISEAEDVPDATIPDPRPTILGLVQSDPEQFGILGRAVGTVDSLVEVLGNPGSRLTVF
APTDEAFTNLANTLVPDANLEASDKDAVVEALVTAIAPLADVEAAGGATIESILLYHALG
MAAPLGKLEEMKTAKTLQGGVLSFNSGSVTDDDPSREDAVVDPRNIFTQNGWVHVIDSVL
LPFDLGAVVNPSEPEMPEEGQPIDISEAEDVPDATIPDPRPTILGLVQSDPEQFGILGRA
VGTVDSLVEVLGNPGSRLTVFAPTDEAFTNLANTLAPDANLEASDKDAVVEALVTAIAPL
ADVEAAGGATIESILLYHTLGEASPIQELEKSDTLTTLQGDSISVADGKVTDGDDSRDDA
AISTPNIFLQNGWVHVVDSVLLPFNLGNLASAASPSISPEAEASPNISPEAEASPDEDDD
DDGVCFPESATIRLADGSSVPMHLLEAGTEIHVGREGKTSRIFAFTHKNRVRRTLFYALT
TASGHSVTLTGSHYLYANGKLTAAGAVQIGDMLDTRAGNSQVVRVGRVHGKGLFAPHTLH
GDLEVDGVVVSGYSRALNPTIAHGLLAPVRLLTKYAGVVEPLGSLFYDGADRIASYLPKG
SRRYE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgacgctccgcccgatcatcatcctcctcctcgcactgctcgcggcggccgccgcccag
gacggccccctcccgccctccgccgcggacgacgtgcccgatgccgtcgtaccggacccg
cgcccgaccatcctcggcctcttggcgtctgaccctgaccagttcagcgtgctcgccctc
gcggccctcgccgtgcctgacctgacggaagcgctcggcgaccccaaccgcaggctcacc
gtcttcgccccgacgaacgccgccttcgccgccctcaccaacaagctctccccgggcgcg
ggcgtcgacgccgcggatccggaaggcatcctcttcgccctgatgggcgccttacctggc
ccgcttccgggccgcagcccgggggaagttctcaccaccatcctctcataccacctgctc
gcgttcgcggcacccttccaggagctggagaatgacggcacggcagagacggtgcagggc
accttgctccgcttccgcgatgggcgcgtggttgaccgcgaccccagccggaggaacccg
cgccccgacccgcgcaatgtgttcacgcagaatggctgggtgcacgtcatcgacactgtc
ttgctgccgttcaacctagaaaccgcgcttgccccgctcaccccggacggccccgacccc
atccccatcgaggaggcagaagatgtgcccgacgccattttgctggacccgcgacccacc
attctggggtttgttgagtcccggccggactcgtttgggattcttgcacgcgccgtcggt
accgtcgattcgctcgtgaaggcgctggacgaccctaacagtaggttcactgtcttcgcg
ccgacggacgaggcttttaccgcgctggcgaaccagctcgtaccaggcgcggacttgaac
cccgcggataaggacgccgtcgtggaagcgctggtgtcggccatcgcgccactcgccgac
gtcgaggccgcggcaaactccaccatcgagtccatcctcggctatcatgcgctccccttt
gctgcgcctttccaggagttagaagacatgagtagcgcggagacagtgcagggagacgcg
ctcaggttcgcggacggccttgtcatcgacgccgacgagtcgcgggagaaccctgttgct
gacccgcgcaacttcttcccgcagaacggatgggtgcatgtcatcgacttggtgctgctt
ccgttcgatctagacgccgtcttgggtccttccgagccggaaatgccggaggaggggcag
cccatcgatatctcggaggccgaggatgtgccagacgcgacaattccggacccgcgcccg
actattttaggacttgtgcaatcggacccggaacagtttggtattcttggtcgtgccgtc
ggcaccgtggactcgcttgtcgaggtgctgggtaaccctgggagcaggctgactgttttt
gctccgacggacgaggctttcacaaacttggcgaatacgctcgtaccggacgcaaattta
gaagcgtctgacaaggatgctgtagtcgaagccctcgtgaccgcgatcgcaccactagct
gacgtcgaagccgctgggggcgccacaattgagtctattcttctgtaccatgcactgggt
atggccgctccgctcgggaaactggaagagatgaaaacggccaaaactctacagggcggc
gtgctttctttcaacagtggctctgtgacggacgacgatccttcgcgtgaggatgccgtg
gtcgatccgcgcaacatctttacgcagaacggatgggtgcatgtcatcgactcggtgctg
cttccgttcgaccttggcgccgtcgtgaatccttccgagccggaaatgccggaggagggg
cagcccatcgatatctcggaggccgaggatgtgccggacgcgacaattccagacccgcgc
ccgaccattttaggacttgtgcaatcggacccggaacagtttggtattcttggtcgtgcc
gtcggcaccgtggactcgcttgtcgaggtgctgggtaaccctgggagcaggctgactgtt
tttgctccgacggacgaggctttcacgaacttagcgaatacgctcgcaccggacgcaaat
ttagaagcgtctgacaaggatgctgtagtcgaagccctcgtgaccgcgatcgcaccacta
gctgacgtcgaagccgctgggggcgccacaattgagtctattcttctgtaccatactctc
ggcgaggcttccccaattcaagagcttgagaagagcgacacccttaccactctacaagga
gacagcatctcagtcgctgatggaaaggttactgacggcgatgactccagggatgatgcg
gcgatctcaaccccaaacatattcttgcaaaacggttgggtgcatgtcgtcgactctgtt
cttctcccgttcaacttgggcaatttggcatcagccgcatcaccgagcatatctccggaa
gccgaagcctcgccgaatatatctccggaagccgaagcttcgcccgatgaagacgatgac
gatgacggcgtttgcttccccgaatctgcgacgattcgccttgcggacggttcctctgta
ccgatgcacctgcttgaagctggtaccgaaatccacgtcggtcgtgagggcaagacgtct
cgcatctttgccttcactcacaagaacagggtccgcagaacgctgttttacgctctgacg
acagcctccggacacagcgtgacgctgacggggagccattacttgtatgccaacggcaag
ctgaccgcggctggtgccgtacagatcggtgacatgcttgacactagggccggcaactcg
caagtcgtgagagtcggtcgcgtgcatggcaagggtctgttcgcgccacacaccttgcac
ggggacttggaagtggacggggtggtggtgtccgggtactcgagggctttgaatccgacc
attgcgcacgggttgctcgcacccgtgcgactgctgacgaagtatgcgggagttgtcgag
ccgctcgggtccttgttctatgatggggcagataggattgcgagctacttgcccaagggt
tctcgtcgttatgagtaa
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