Chondrus crispus (carragheen): CHC_T00006926001
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Entry
CHC_T00006926001 CDS
T02916
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHC_T00006926001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccp02000
]
CHC_T00006926001
04147 Exosome [BR:
ccp04147
]
CHC_T00006926001
04090 CD molecules [BR:
ccp04090
]
CHC_T00006926001
Enzymes [BR:
ccp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CHC_T00006926001
Transporters [BR:
ccp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CHC_T00006926001
Exosome [BR:
ccp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CHC_T00006926001
CD molecules [BR:
ccp04090
]
Proteins
CHC_T00006926001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_22
ABC_ATPase
Rad17
AAA_29
RsgA_GTPase
AAA_30
AAA_16
AAA_15
Motif
Other DBs
NCBI-GeneID:
17317974
NCBI-ProteinID:
XP_005710264
UniProt:
R7QRK4
LinkDB
All DBs
AA seq
1173 aa
AA seq
DB search
MVSYHWLQLMVAHRVCARLRRKFFESLMSQDYTWVDQNDGGELTARVAGDVNLIQAGIGD
KVTSAIQFTSMFVIGVIVAFVYGPLLTLVILSVAPLLVLAGGAFAKMASASTGDGLGAYG
AAGAVANETINLIRSVTAYGGQESEARRYEKELQIAYKADVKKAVISGLGMGVTFFIIFS
TYAVAFVFGAWRVREMKLDPGDVLTTFFSVFIACVSIGQAAPSFQAFAVARGAAPRVYEV
IDRPSEINPLTEDEGEVINDFRGRIEFKNVFFNYASRIIDDLEDDAMKEFVLNNFNLDVP
PGTAHALVGSSGCGKSTTVRLVERFYDVQQGEVTLDGVNVRNLNVRWLRSQMGYVGQMPT
LFAMTISENIALGAGLDIAVDKIEGKTVMQRREPTHEDIVRAAKMANANDFIMKLPEQYD
TMLGERGAMLSGGQKQRICIARALIRNPKILILDESTAALDAQSERIVQEALEKASAGRT
TIMIAHRLSTVRNADVISVIDKGTVVEAGTHEGLIDIDNGAYRTLVEHQKIEAKNVEKIQ
QTPADESEFREEALVFKDSVSKTRHDKPIGESDEERESEADVDKGILMRAFAFNRAEWYW
ILIGVVGAAVAGSAFPVMSIVFSRVIFVIMRPADNTPGEIRKWCLYFVAIGGGSFFGYFC
QLSGLGISGERLTLKLRRRSFRAILRQEMGFFDERKNSVGALTTRLATEASLVKGVTGDT
LGLMSFALSTIVTGFAIAYEACWRVALVVTGVFPIMAICGALQMKLMTGFDADSEKMYAE
AGTIASEAVNNFDTVTSVGVQDVFMRKYNAALEIPIRNGRKSAMVAGIMFGISEFLSQAL
WAVSFWIGSIFVRDGFCDFPELMTAITGLLFAGMMLGNASGQASDVSKAKIAATKIFRLL
DRESGIDPSKKTGEVSSISGHLAAEGLRFEYPSRPDVHVLRGASIEVSQGQTLALVGASG
CGKSTTIALLERFYDPREGTIRIDDTEIREYNLNHLRFNLGLVSQEPDLFNRSIRDNIAY
GLDHSDGTPVTDDTIIAAAKAANAHSFISELEDGYDTVVGARGERLSGGQRQRVAIARAL
VREPRILLLDEATSALDAVSERVVQDALDKAAAERTTVAIAHRLSTVKNADVIAVVSKGR
IVESGKHEQLLRIPNGEYANLVKNQLTEATDEE
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttatcattggttgcaactcatggtagcacatcgcgtttgtgcgagactcaga
aggaagttttttgaaagcctaatgtctcaagattacacctgggtcgatcagaacgatggt
ggagagcttaccgcacgagtagcgggtgatgtcaatttgatccaggcgggcattggagat
aaagttaccagtgcaattcagtttacgtccatgtttgtcattggcgtcatcgttgccttt
gtgtatggccccctgctcacactcgtcatactctccgtcgcccccctgctcgtcttggcc
ggtggggcctttgcaaagatggcttccgcttctacaggcgatggcttgggagcctacggt
gcagctggcgctgtcgctaatgagactatcaacctcattcgctctgttaccgcgtacggt
ggccaggagagcgaggcgaggaggtatgagaaggagttgcagatcgcgtacaaggctgac
gtgaagaaggccgttatcagcgggttaggcatgggcgttacctttttcattatattctct
acgtatgcggttgcgtttgtgttcggtgcgtggagagtaagagaaatgaaattggatccg
ggggatgttctcaccacttttttttccgtttttatcgcttgtgtttcgatcgggcaagcc
gctccatcattccaggctttcgcggtagctcgtggggctgccccacgcgtgtatgaggtt
attgaccgaccgtctgagataaaccccctgacggaagatgaaggtgaagttatcaatgac
tttaggggtcgcattgagtttaagaacgtctttttcaactatgcctcacgtatcatcgac
gacttggaagatgatgctatgaaagagtttgtcctgaacaacttcaaccttgatgtccct
ccaggcacagctcatgcgcttgtcggatcgagcggatgcggcaaaagtaccacagtgcgt
ctggttgagaggttttacgatgtgcagcaaggtgaagttaccttggatggcgtaaacgtt
cgcaacttaaacgtccgctggctgcgcagccagatgggatatgtgggccaaatgccgacg
ttgttcgcaatgacgatcagtgagaacatagcgcttggtgccggactggatattgcagtt
gacaaaatcgaggggaagacagtcatgcagcgcagggaacctacacacgaagatattgtg
cgtgcagcgaaaatggcgaacgccaacgacttcatcatgaagttgccggagcagtacgac
acaatgctcggtgaacgtggggcaatgctcagtggtgggcagaagcaaagaatttgcata
gcgcgagccctcattcgaaacccgaagatattgattctggacgagtccactgctgctctt
gacgctcaatcagagcgtatcgtgcaagaggcgttagaaaaggcatctgctggacgcacg
acaatcatgattgcgcacaggttgagcaccgtgagaaacgcagacgtgatatctgtcatc
gacaaggggaccgtcgtggaggccggtactcatgaaggtcttattgacattgacaacgga
gcataccgtacgcttgttgaacaccagaagattgaagcgaagaacgttgaaaagatccaa
caaacccccgctgatgaatctgagtttagggaagaggcccttgtctttaaggactcagtt
tccaagactcgacatgacaaacctatcggtgaatctgatgaggaaagagaaagtgaagcg
gatgtcgacaaaggtattctaatgcgtgcctttgcgttcaaccgagctgagtggtattgg
atcttgatcggagtcgttggagcggcggttgccggttccgcctttccagtcatgtctatt
gtcttctcaagggtcatttttgtcataatgcgaccggcagataacactccaggggagatt
cggaagtggtgtctctacttcgttgcgattgggggtggttctttcttcggctacttctgt
cagctgtctggattgggaattagtggagagcgactgacattgaaactgaggcggagaagt
ttcagagcaatcttgagacaggaaatgggatttttcgatgagaggaagaactcagtgggc
gccctcacaacacgacttgccactgaggcctcgctggtgaagggtgtaactggggataca
ttgggtctcatgtcgttcgctttgagcacaattgttactgggtttgctatagcatatgaa
gcgtgctggcgcgtagccctcgtggtaacgggcgttttcccgattatggctatttgtggt
gcattgcaaatgaaactgatgacaggttttgacgctgattcggagaagatgtacgcagag
gcgggtactattgcgtccgaggcagtgaataactttgataccgttacatccgtgggtgtg
caggatgtcttcatgcgaaagtataacgcagcacttgagattccaattaggaatgggcgc
aagtcagcaatggttgccgggataatgttcggtatctccgagtttctatctcaagcactc
tgggctgtgagcttttggattggctcgatctttgtccgcgatggattttgcgattttccc
gagcttatgacagcgatcacgggacttctcttcgccgggatgatgcttggaaatgccagt
ggtcaagccagtgatgtgagcaaggcgaaaattgctgctaccaaaatcttccgccttttg
gatcgtgaatcgggcattgacccaagtaagaagactggagaggtgtcttcaatttccggt
catctggcggcagaagggttgcgatttgagtatccgtcgcgtccggacgttcacgttctt
cgaggggcatccattgaagtatctcagggccaaacgttagcattggttggagctagtgga
tgtggaaaatctacgactattgcccttttggagcgattctacgatcctcgcgaagggact
attcgaattgatgatactgaaatccgagagtacaacctgaatcacctgcgattcaacttg
ggtcttgtttcccaagagcctgatcttttcaataggagtatacgggacaatattgcctac
gggctggaccactctgatgggactccggtgacagatgacacgatcatagcagctgcgaag
gctgccaatgctcactcattcatttcagagctggaagacggatatgacactgtcgttggc
gcacggggggaaagactttcaggcgggcaacggcagcgcgtggcaatcgctcgagcgctc
gtgcgagagccccgaatccttctactggacgaagcaacttctgcactcgatgcggtgtcg
gagcgagttgtacaagacgcgttggacaaggcagcagcagaacgcacgacggtggccatc
gcgcatcggttgtctacagtgaagaacgccgatgtgatagcggtggtgtcaaagggtcgg
attgtggaaagcggaaaacatgaacagctgctgcgcattccgaatggagagtatgcgaat
ctggttaagaaccagttgactgaagcgaccgacgaagaatga
DBGET
integrated database retrieval system