Chondrus crispus (carragheen): CHC_T00008664001
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Entry
CHC_T00008664001 CDS
T02916
Name
(RefSeq) WD40-repeat containing protein
Organism
ccp
Chondrus crispus (carragheen)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
NB-ARC
AAA_22
Motif
Other DBs
NCBI-GeneID:
17322306
NCBI-ProteinID:
XP_005714597
UniProt:
R7QAF2
LinkDB
All DBs
AA seq
1311 aa
AA seq
DB search
MADPCSILGLTGPAEQVVRLIASLIARHQAYKKNKTLSTEMLTAYTNLQRDITELEKMPI
HGTSSQHTGLLRREIADISSFILKSFAELQKESKDPKARLGAFASAMGDREVLEKRKQEA
DRLHKRIVQASTGIDTRTAVESIRRGTGNMFRASIRAEHNPASICVKLDSRGSDGLPNTC
ESRLKAAVLRRDRNKQVGATAVGQGGVGKTCALRAIAHDVEIMAEFSGGVYFMLLGKDGN
VGRLIEELCLIVEASGGNQTAVEMREQSEFERVLAKVQAWFCSHVCLFIIDDVWVVNDID
ANILQKLSVLAETAGGSGGRRSRLLYSTRDKELRQIGERVAFEPREKVGKEAVEMLVHAS
EANGEEVDDVRCKEAVGEILKMCGGLPLALNVAGTSVRYVRERWEGEVSEAWGAYLSKMK
SRNTIRGESPKDGYSSLDGTLHTSLDILEADVGRSGETVGEFSFRKMHRSLCVMKKQDRI
PLSLVGDLWEMDEERTERCSKEMERVGLVEVQYEKDCGGLRVHDLTHDFAVEEAKKKEGV
EEWYKKMADVCRAGEGLLAMSEDRDGEGKSAREEYVFENIYRVLQQGGCVEDLKRLFLSA
RWVKTVMRRGGVWQYEKAVKGLSRDLKGKRGSGKVGMGRADEDAVDGMVLMMRAARLSVP
FCGENSAGIYFQLYGRVKHKARDSSCVRKMLEEIERYAPRPWVRPVSECVARADGKMVEQ
IVLPYFSTEIQVGMDSSGEVYGCQVARLPAEVTVIVFTQSAEKETKMVELEGEFETESQG
PGANERSSQLEGEFETESQGPGDLEASRRKMCRRLRAYFGMCFGSVTSEVTGENPSVAAE
NPSVTRATCATLCKRKENVVVGYEDGTLRLWSTSGKKVLRSFHGHRSRVHCVAMSGDGKR
VVSGSFDKSVRVWDVETGAQVGEAFVGHTDRVYSVAMSGDGRRVVSGSNDKSVRVWDVET
GAQVGEALVGHTGSVDSVAMSGDGRRVVSGSEDMSVRVWDVETGAQVGEALVGHTGEVWS
VAMSGDGRRVVSGSEDKSVRVWDVETGAQVGEALVGHTGWVCSVAMSGDGRRVVSGSYDG
SVRVWDVETGAQVGEALVGHTGSVDSVAMSGDGRRVVSGSEDMSVRVWDVETGAQVGEAL
VGHTEGVLSVAMSGDGRRVVSGSEDMSVRVWDVETGAQVGEALVGHTDYVCSVAMSGDGR
RVVSGSYNRNVRVWDVERGITLHTGWEEDWEEIVARFLNMADFDTASRAGRRSEIFLREF
AKEGRIVQLREDGSEAVLAQLDDPRDLQIDHDHGVAVAGVGNLVAIMKVVV
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccatgcagtatcttgggcctcaccggcccggctgagcaagtcgtccgcctc
atcgcaagtctcatcgctcgacaccaagcctacaagaaaaacaagacgctctctaccgaa
atgctcaccgcgtacaccaacttgcagagagacatcacggagcttgaaaagatgccgatc
catggaacgtcgtcgcagcacacgggcttgctccgacgtgaaatcgcggacatctcaagc
ttcatattgaagtccttcgctgagctgcagaaagagtcgaaagacccaaaagcgagactc
ggtgcgttcgcctctgcaatgggagatagagaagtcctagagaagcgaaagcaagaagcg
gaccgccttcacaaacgtattgtacaagcaagcacgggcatcgatactcgcacggccgtc
gagtcgatcagacgaggcacgggtaatatgttcagggcgtcgataagagccgaacataat
cctgcgtcgatatgtgtgaagcttgattctcgggggagcgatggattaccaaacacgtgt
gagtcgcgtctaaaagcggctgtgctacggagagataggaacaagcaagtgggtgcgaca
gcagtgggacagggcggagtcgggaagacatgtgctctacgagcgatcgcgcacgacgtt
gagattatggcagagttctcgggaggagtgtacttcatgttgttggggaaagatggaaac
gtgggacggctgattgaagaactgtgtctgattgtggaagcgtccggtgggaaccagacg
gctgtggaaatgcgagagcagagcgagtttgaaagggtgttagcgaaggtacaagcgtgg
ttttgtagtcatgtgtgcctgttcatcattgatgatgtgtgggtggtgaatgatatagac
gcgaatatccttcaaaagttgtctgttctggctgagactgcggggggcagcgggggaagg
aggagcagactactgtattccacgagggataaggagctgcgtcagattggggagcgggtt
gctttcgagccgagggagaaggtagggaaagaagcagtcgagatgcttgtgcacgcgagt
gaggcaaatggagaggaagtggatgatgtgagatgcaaggaagccgtgggtgaaatactg
aaaatgtgtggcggattgccgcttgcgctgaacgtggcgggaacgagcgtgaggtacgtg
agggaaagatgggagggagaagtatcagaagcatggggggcgtacctttcgaagatgaag
agtcgtaacacgattcgcggggagagtccgaaggacggatattcgtcgttggatgggaca
ttgcatacgtctctagatatcctggaggccgatgtgggaaggagtggggagacagttggt
gaattttcgtttcgaaaaatgcaccggagtctgtgcgttatgaagaagcaagaccggata
cctttgagcttggttggagatttgtgggagatggacgaggagcggacggaaaggtgttca
aaggagatggaaagggttggactagtagaagtgcagtatgagaaggattgtggtgggttg
cgggtgcatgatctgacgcacgatttcgcggtggaagaagcgaagaagaaggagggtgta
gaagagtggtataagaagatggcggatgtgtgcagggcaggagaagggttgcttgcgatg
agtgaggaccgagacggagaggggaagagcgcacgggaggagtatgttttcgagaatata
tatcgtgtcttgcaacagggtgggtgtgtagaggatctgaagaggctatttttgagtgcg
cgatgggtgaagacagtgatgcggagaggcggggtttggcaatacgagaaagctgtgaag
ggattgagtagagacttgaaggggaaaagaggaagcgggaaggtgggaatgggacgggca
gatgaggatgcagtggatggaatggttttgatgatgcgggcggcgcgactgagtgtaccg
ttttgtggtgaaaacagtgccgggatttactttcaactatatgggcgagtgaagcacaag
gcacgggattcaagttgtgtgcgaaaaatgctggaggaaattgagagatacgcaccacgg
ccgtgggtgcggcctgtgagtgagtgtgtagcgcgagccgatggaaagatggtggagcag
attgttctgccatatttcagtactgaaattcaagtgggcatggattccagtggtgaagtg
tatggatgtcaagtggcgcggctcccggcagaagtaacagtaatagttttcacgcaatct
gctgagaaggagacgaagatggttgaattggaaggcgagttcgaaacggagagccagggc
ccaggggccaatgaaagaagcagtcaattagaaggcgagttcgaaacggagagccagggc
ccaggggatcttgaagcaagcaggcgcaaaatgtgtcgacgtttgagggcatattttgga
atgtgctttggaagtgtaacctccgaagtgactggagaaaacccgagcgtggctgcagaa
aacccgagcgtgacaagagccacctgcgcaactctctgtaagaggaaggagaatgttgtt
gtgggatatgaagacgggacgttaaggctgtggagtacgtcggggaagaaagtattgaga
agtttccacggtcataggtcgagagtgcattgcgttgcgatgagtggggacggaaaacgt
gtggtatctggatcgttcgacaagagcgtgcgggtgtgggacgtggagacaggagcacaa
gtcggggaggcgtttgttggacacacggatcgggtgtatagcgttgcgatgagtggggac
ggaagacgtgtggtatctggatcgaatgacaagagcgtgcgggtgtgggacgtggagacg
ggagcacaagtcggggaggcgttagttggacacacgggttcggtggatagcgttgcgatg
agtggggacggaagacgtgtggtatctggatcggaggacatgagcgtgcgggtgtgggac
gtggagacgggagcacaagtcggggaggcgttagttggacacacgggtgaggtgtggagc
gttgcgatgagtggggacggaagacgtgtggtatctggatcggaggacaagagcgtgcgg
gtgtgggacgtggagacgggagcacaagtcggggaggcgttagttggacacacgggttgg
gtgtgtagcgttgcgatgagtggggacggaagacgtgtggtatctggatcgtatgacggg
agcgtgcgggtgtgggacgtggagacgggagcacaagtcggggaggcgttagttggacac
acgggttcggtggatagcgttgcgatgagtggggacggaagacgtgtggtatctggatcg
gaggacatgagcgtgcgggtgtgggacgtggagacgggagcacaagtcggggaggcgtta
gttggacacacggagggggtgcttagcgttgcgatgagtggggacggaagacgtgtggta
tctggatcggaggacatgagcgtgcgggtgtgggacgtggagacgggagcacaagtcggg
gaggcgttagttggacacacggattatgtgtgtagcgttgcgatgagtggggacggaaga
cgtgtggtatctggatcgtataacaggaatgtgcgggtgtgggacgtggagagagggatc
acacttcataccgggtgggaagaggattgggaagaaatcgtggctcggttcctgaacatg
gcagactttgatactgcttcccgcgcaggacgaagatcagaaatatttttaagggagttt
gcaaaggagggaagaattgtgcaattgcgagaggatgggtccgaggccgtcttggcccag
ttagacgatccacgagacttgcagatagaccacgatcacggggtcgcagttgcaggggtg
ggcaatctggttgctatcatgaaggtagtggtgtaa
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