Corvus cornix (hooded crow): 104688356
Help
Entry
104688356 CDS
T03546
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104688356 (SNAPC4)
03021 Transcription machinery [BR:
ccw03021
]
104688356 (SNAPC4)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
104688356 (SNAPC4)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
104688356 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
104688356
NCBI-ProteinID:
XP_010396123
LinkDB
All DBs
Position
17:complement(2651228..2665720)
Genome browser
AA seq
1548 aa
AA seq
DB search
MSRGPGRAEPLRSPEGLDLDAEREKIRREIEQLERSLQPGGADIPLALSDSSLSSDDDNE
DDDDEDSHAEMEVEREEDSSDDDDDDIESLPQDPETCLQMNYVYQEIIKEKIEEVELLIA
QNKEQQKEIMCELDGSKTAKAGDGRNLPANVFLGHFMKPYFKDKTTGIGPPSNEDAKEKA
AQGIKSFEQLHSAKWKTREKTLLQKSVVSDRLQRLLQPKLLKMSYWNQKLEKVKTETEKQ
TLEKQIKGLEQEIESINQLPESDLIGNRFDEHDWDKISNIHFDGQRSSEELRKFWQNWEH
PSINKKEWTEEEIERLKQIAAKHNYLDWQTIAQELGTNRTPFQCLQKYQIYNKDLKRKEW
TKDEDQMLLELVQEMRVGSHIPYKKIAYYMEGRDSAQLIYRWTKNVDPSLKKGPWTAEED
AMLMAAVTKYGAKDWYKIRTEVPGRSDAQCRDRYLKALHWDVKKGKWSLEEEEQLIELVQ
KHGLGHWSKIASELPHRTGSQCLSKWKLMIGAKKKRSGATKRRHAEESSSPSESSSEEDM
ELNLTDSSEEEEVTSTTRKKEYAVPSIDLWIPTGTDMQEATGERYQIQSLLSAARAGAGT
SCSDIPRAARDGDRAADKSSELYTLLKGIAQPHSTDVVVKNAAEVMARASQSGKQVLQVS
LEDVRTILKNNTSFQRRLMLRPPGSLLAKPPGVGAAVGQDVQGLQELPKRAQRWAREHWK
RLSLDRKLLMAVTPWVGNVLLPRTLQAGRMAFHQTKAAAIQEKVKSVSLTSTPLFALLIQ
LFQIDTKGCMKIIKERKLRQLELLKANARSPQQASQNTETSSGNSSQPCSQRNSQRGIPR
NTVRRPLALRAREPSTGALESCAAVQGQGRKAKTVLELLREKRLRESQAKKAMQRTVLVA
PQVLVSGPLIIQHPPQQIIPSAQAASKPAAAAGTDSQVRGSPLPTRTSSAGSASALVPEN
HSSAVPETGESPGCSQGTDLQSKKELKEQALESSPEGRGFPGKDPSAAEKAPEQRGCNGQ
VTASSSASAVLQNQAFVPQQITVVPLGLESGTNKLSLSTPVTCELKSNGPQQRPVSLLPA
LVTPQAGSPVIPNSILPLAWVVTPQALLPSAVQTVVGVPQGMPGAAGGSQCQPAVTSNGN
VSGLGGTPAGANPPQPSSAETKGPSSQLAGVPLGKDDQSTVLLPVASVSPGCSTSSVSAV
TPSCSDGSSMAPDSSAPPAAPPADSPAPCAVVLPQTQPPASTQGSDSQPVPSLTSLGKSS
DSVTTKRSSSNPDSIRKCVVLQPGAAAPHSNVPGSSGCSGAQARKKRPIASKPPSADVPP
QPSTSSAEKNLLDFSLISLEDEGLVKEWLSGKRGVQVPSLQTRLPYLPPFLCNIKTLSKL
LVQKAALEEQAASLLPSEASGDGGTGDVFHAIGELVQQKLGDNPAYLLLKARFLAAFTLP
AVLATLPPPKVTTTLSASRKQYEESDDEEWQSEKEVSEEESCGNELTGVQEDWRLGDEPG
DKDLDLLNQGMRAEESAAQSALGSCTDVADARAPQIRRSARFRKRRRL
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgggccgggccgggccgagcccctccgttcccccgagggcctcgacctcgat
gcggagcgggagaagatccgccgagagatcgagcagctggagcgtagcctgcagcccggc
ggggccgacatccctctggccctgtccgactccagcctcagctccgatgatgataatgaa
gatgatgatgatgaagattctcatgctgaaatggaagtggaaagagaagaagacagcagt
gatgatgatgatgatgatattgaaagcctgccacaggatccagaaacctgcctgcagatg
aactatgtgtaccaggaaattatcaaggaaaagattgaggaagtggagctgctcattgca
caaaacaaagaacagcagaaggaaatcatgtgtgagcttgatggttcaaaaacagcaaag
gcaggagatggcagaaatctaccagcaaatgtgtttttgggtcattttatgaagccatac
tttaaggataaaacaacaggaattggccctccttccaatgaagatgccaaggaaaaggca
gctcagggcataaaatcctttgaacaactgcattcagccaagtggaaaactagagagaag
acgctgctgcagaagtccgtggtgagcgaccgcctgcagcgcctgctccagccaaagctg
ctcaagatgagttactggaatcagaaactggagaaagtcaagactgaaacagagaaacag
accttggaaaagcaaatcaaaggcttggagcaagaaatagagtcaattaaccaactccca
gaaagtgacttaataggaaacagattcgatgagcatgactgggacaagatttcaaacatc
cattttgatggacaacgtagctcagaagaactgaggaagttttggcaaaattgggagcat
ccaagcatcaacaaaaaggaatggactgaggaggaaatagagaggctgaagcagatagct
gctaaacacaactacctggactggcagaccattgcccaggagctggggacaaacaggaca
cctttccagtgcttgcagaagtaccaaatctataacaaagatttaaaaaggaaagaatgg
accaaggatgaggatcagatgcttttagagcttgttcaagagatgagagtgggaagccat
atcccatacaagaaaattgcttattacatggaaggaagagattctgctcagctgatttac
cgctggacaaagaatgtggaccccagcttgaagaaaggaccctggacagcagaggaagat
gctatgctgatggcagcagttaccaagtacggggcgaaggactggtacaaaatccgcacg
gaggtgccgggcaggagcgacgcccagtgccgagaccggtacttaaaagcattgcactgg
gatgtaaagaaaggcaagtggagcttggaggaagaggagcagctgattgagctggttcaa
aaacatggcctgggtcactggagtaaaatagcttccgagctgccacatcggactggctcc
caatgcctgagcaagtggaaactcatgattggtgctaagaagaaaagatctggggcgacc
aaacggcgtcacgctgaggagagctccagcccttcagagagcagcagtgaggaggacatg
gagctgaacttgacagacagctcagaggaggaggaggtgaccagcaccacaaggaagaag
gagtatgcagtccccagcattgacctgtggatcccaacagggactgacatgcaggaggca
acgggagagagataccaaatccagtccctcctctctgctgcgagggctggtgcagggacc
agctgcagtgacattccaagggcagccagagatggagacagagctgctgataaatcctct
gagctgtacaccctgctgaagggcattgcacagccccattccacagacgtggtggtgaag
aatgcagcagaagtgatggccagggcttcccagagtggaaaacaagtgctgcaggtcagc
ctggaggacgtgagaacaatattaaagaataacacgagcttccagaggagacttatgcta
agacctcctggcagccttttagccaaacccccaggagtgggtgcagctgttggccaggat
gtccaggggctgcaggagctgccaaagagagctcagcgctgggccagggagcactggaag
cggctgagcctggacaggaagctgctgatggcagtgaccccctgggtgggcaatgtgctg
ctgccccgcaccttgcaggctgggaggatggcttttcaccagacaaaagctgctgctatt
caagagaaggttaagtcagtcagtcttactagcactcccctgtttgcactgctcattcag
ctcttccagattgataccaaaggctgtatgaaaattattaaggagaggaagctgaggcag
ttggagctgcttaaggctaatgcaaggagtcctcagcaggcttcccaaaatacggagact
tcttcaggcaattcatcccagccttgttcccagaggaattcccagcggggcataccaagg
aatactgtcaggagacctcttgccttgagagcacgagaaccttccactggtgccttggag
agctgtgcagccgtgcaggggcaggggcggaaggctaaaactgtcttggaattgctgcga
gagaagcgtttaagggagtcccaggccaagaaggccatgcagaggacagtgctggttgcc
ccacaggtgctggtttcagggcctctgataatccagcacccaccacagcaaatcattccc
tctgcacaagcagcaagcaaacctgcagcagctgctggtacagatagccaagtacggggt
tcaccattgcccacaaggacttcttctgcaggttctgcttctgcgctcgtgcctgaaaac
cattcctcagcagtgccagaaactggggaaagccctggttgctcacaagggacagatcta
cagtctaagaaggagctaaaagagcaagctctggaaagcagccctgaaggaaggggtttt
ccaggcaaggatccatctgcagcagagaaggccccagaacagcgagggtgcaatggtcaa
gtcacagccagtagctcagcttcagcagtgttgcaaaaccaggcttttgtgccacagcag
atcacagtggtgccccttggcctggagtctggcaccaacaaattgtccctttccactcca
gtcacctgtgagctgaagagtaatgggccacagcagaggccagtcagcctgctgcccgct
cttgtcactccacaggctggttcacccgtgattcccaacagcatcctgcccttggcgtgg
gttgtcaccccccaggctctgctccccagtgctgtgcagactgtggtgggtgttccccaa
ggaatgccaggtgctgctgggggaagtcagtgtcagccagctgtgacttccaatggcaat
gtctctggtttgggagggactccagctggagcaaatccacctcagcccagcagtgcagag
acaaaagggccaagttcccagctggcaggagttcctttgggaaaggatgaccagtccaca
gttctcttacctgtggcctcagtgagtcctggatgcagcacatccagcgtttctgctgta
accccctcatgttcagatggctcctccatggctccagactcctctgctcctccagctgct
cctccagctgacagcccagccccgtgtgctgtggtgctgccccaaacacagccccctgcc
agcactcagggctctgattcccagcccgtgcccagtctcaccagcttgggaaagagcagt
gactctgtcacaacaaagagatcatcctccaatccagacagcatcaggaagtgtgttgtg
ctccagccaggagctgcagctcctcacagcaatgtcccagggagctctggttgctctggt
gcccaggcacggaagaagagacccattgcctccaaaccaccaagtgctgacgtccctccc
cagccaagcacttccagtgcagagaaaaatctccttgacttcagcctgatctccctggag
gatgaggggctggtgaaggagtggctgagtgggaaacgaggggtccaggtgccatcactg
cagaccaggctgccttatttgccaccttttctctgcaacataaaaaccctctcaaaactc
cttgtgcagaaagcagccctggaagaacaagcagcctctctcctgccctctgaggccagt
ggggatgggggcactggggatgtcttccatgctattggagaactggtgcagcagaaactg
ggtgataaccctgcttacctcctgctgaaagccagattcctggcagccttcacactccca
gctgtcctggcaactctgcctcctcccaaagtgacaacaactctgtcagccagcaggaag
caatatgaggagagtgatgacgaggagtggcagagtgagaaagaagtgtctgaggaagag
agctgtgggaatgaattaacaggagtacaggaggattggagacttggggatgagcctgga
gacaaagatcttgatttactaaaccagggcatgagggctgaagagagcgctgctcagtct
gccttgggctcctgcactgatgtggctgatgccagagctcctcaaatcaggagaagtgcc
cgcttcaggaagaggaggaggttatga
DBGET
integrated database retrieval system
