Corallococcus coralloides: COCOR_03258
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Entry
COCOR_03258 CDS
T01780
Name
(GenBank) RHS repeat family
Organism
ccx
Corallococcus coralloides
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
Motif
Other DBs
NCBI-ProteinID:
AFE05111
UniProt:
H8MGJ6
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All DBs
Position
3988878..3994754
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AA seq
1958 aa
AA seq
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MPVPVGSLRPTYSETDFSLSSAIGDFALTRTFSASTKANALGTPEQKLLTPFGRVMMGPD
GGGNSYRWTHNLYSYVLTSVHEEMDSSGTERIDTTICNIVTPAGSSLRFSPCDKTEPGRF
ATSSSDQHVKLRWDGNGFTLISPEGRFRYTHAVAVGGQTQNFPPTTRWGSAYFLTDIEPT
SYGTTTTAGSNGRRIIASIQYYSAKPLGCTDPAATFGNPSQLIQYVNLANGSRLAFSYVS
RPTQDTILQDEDNPLYSTHECVLDKVDQEEGTSGTGLGTRNIVTYDYAMHNSSGQEISHP
AGMLGGARFFVGVSQDVPVGAEAPVPTRMRYTWADQESLNQVTWRVFRNDEMLSHKRLHR
KMFYILEDGQSNTHLNPQSVTAEVVGSGPNCGPGVLSGSCASSQKQNFTENVRAGDGSFL
YSSPLARVFVAHQSKTHGVYTSASEVRCGMNGVNNDSFCKGVGISLTPQHSRAWGIDALP
KEQVTERKTSMASSQKDARGAYAVFTNQLATKGTSRNEVPWDPDSFFLPPGEMIRADFGA
VDVAGNGALLTKFYSYEYGRAGTYPGYEQQLKTETSTSAMLGQPGVDRQAKWTYQYESTT
NRLMAKVRGGYTWDFTTGFGAPVYKYQATFYRTYRACSGETPAAADPQARVVEVEGPCWV
AAEDSTSCLDSGPLTQYFYGAANAPNGQQQRLIRKRVSANVTKSTSPTCRYSNWLETTYD
AYDEQGHLLRTTDPAYVRTHYAYIAGKLVRKTVKSRGGALPDLVTDYGYDNGQHGDYIRY
PDGRYEVQCYRSGAWNGCTGGTLTDKLQWKATAPTANGLNYSERVNYFYQYGRLVKEETL
AAGGGVRARRTYDADPLGRPTYQGVGEELGGASNGDFTYSSTRLFDPENNLIREGLPYLS
SAGRPPAFCGGFNTTSGALNALPPECRAFEYDRLNRLVMMLEAAGPMGGSAPSATHVAYD
VAGNVRSIKHGCSAGSTMGSCGNQPAVDYLHDDFGNLLEVKTPWGASASSGPSVTRFAYD
SLGNPTVKQTSQMAQSGSWTAFSHDALGRLRVADARRSTQTERLFQTFYEDHFPGLPSGC
PDSHYGQPHYTVDSFGATWFQYDAFGRLTAKFRVRGAETSPPSRPCNTSAYAPGKDSPNH
IFNYDLAGRLVFEIYPYGRGIEYRYHAASTGMPHRVSSIYAAHLYPGGGSSIDPLITGVE
WEPYGGVKSYWVHSRGETGVPTVAKIQYHQGGKNTALGNCSQTAFSQVVDGVGSPPFGRL
SGLSVTRANLGDVFKRTYRYRADLLLDEDTCVLQSSSTAIPSTQYYGSESGASGFDARLQ
LRNVTNWPNNSPWADQSISYTYDARGNRTSENYSGSSVQSEYTSAFPNVDQLVTRKYSAP
ACLPGACLSYGITARYQHDMSGRVSNMSWYLSQTETQPYYSLTLNATTASPMDLGAVYRQ
VSSTQLGGPGSNYEYFYDSVGRRRLKRSWDGREDEYFYSGTQLLVDVGQISANPSTTDYV
LDEYVWLDGRPVALIKSRFAHSPFLRMADNTQDCSRFGVDTDVPCGTYFPVTDGLGKPVL
LLDSKGRISGVGDYEPFGHVNRRTHFAANQNMMYYPYMAKLNAPTSAGLTTQVRARLEWI
QTNKQGRIMLTDIDGETLPGFGSGVGEISGGVKGRVMTRGWVGTPSDGTFYVSQGPDTSD
DWIPTVGYLSGFEYRRFEPNAKPVWLPLRLPGQYYDPETDLFENWNRYYDPSIGRYLAPE
PLASSPSAMLSGAKSGMSMLMYSYAQNNPISMKDADGNKVAFNLSHDDVIALFTATGLTV
GDLDTMFREKIGAKYKALADDANFVANVWSVGSFGAKTQALWRARVDGAGGVSEPINAGA
ASMSVVDLGMVSSAKYQAAFASAKLGDDPLWGPPVSTTLPAYIAHELGHAWSYMNGHLPG
SQGSIDAALEFEAAVRPKPWVPSLLGPSVGGPRTKEKP
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtacccgtgggctcgctgcgcccgacctattcggagacggacttcagcttgtcc
tcggcgatcggggactttgcgttgacccgtaccttctccgcatcgaccaaggcgaacgcg
cttggaactcccgagcagaagctgctcacccccttcggccgcgtgatgatgggaccggat
ggagggggcaactcctaccgctggacgcacaacctgtacagctatgtcctgacgagcgtc
catgaggagatggactcctcgggcacggagagaatagacaccaccatctgcaacatagtg
acacctgctggaagctccttgcgcttcagcccttgcgataagaccgagccgggacggttc
gcgacctccagctccgatcagcacgtcaagctgcgctgggatgggaatggcttcacgctc
atcagccccgagggacgctttcgttatacccacgctgtcgcggtaggcggccagacgcaa
aacttcccgccgaccactcgatggggttcagcctatttcctgacggacatcgagccgacc
agctacgggacgaccacgaccgcgggctccaacggccgacgcatcattgcatccattcag
tactactcggcgaagccgctggggtgcaccgaccctgcggcgacgttcgggaacccttcg
caactcatccagtacgtcaacctggcaaacggttcccggctggctttctcctatgtgagc
cgccccacccaggacaccatcctgcaagacgaagacaatcctttgtactccacccacgaa
tgtgtgctcgacaaggtcgaccaggaagagggcacttctgggacggggctgggaacgcgc
aacatcgtcacatacgactacgcgatgcataacagttccgggcaggaaatatcccaccca
gcggggatgttgggaggggctcgcttcttcgtaggtgtgtctcaggacgtgcccgtcgga
gcggaagcgccggtgcccacccggatgcgctacacctgggccgatcaagaaagcctcaac
caggtcacgtggagagtgtttcgcaatgacgaaatgctctcccacaaacgactgcaccgg
aaaatgttctacatccttgaggatggccagtcgaacacgcacttgaatccgcagtcggtc
actgcggaggtggtcggttctggtcccaactgcgggcccggcgtgctgagcgggtcgtgc
gcgtcctcgcagaagcagaacttcaccgagaatgtccgtgctggcgacggctccttccta
tattcgagtccattggcgcgtgtattcgtggcccaccaatcaaagacccacggcgtctac
acgtcggcgtcggaggtgcggtgcggcatgaatggcgtcaataacgattcgttctgcaaa
ggggtgggtatcagcctgacgccacaacattcgcgagcgtggggcattgatgcattgcca
aaagaacaagtcacggaacgcaagacctcaatggccagttcccaaaaggacgcgcgaggt
gcctatgccgtattcacgaaccagctcgcgacaaaaggcaccagtaggaatgaagtgcct
tgggatccagatagcttcttcctcccgccaggcgagatgatccgagctgacttcggggcc
gtggatgtggcaggcaatggcgcattgctcacgaaattctactcctatgagtatggccgg
gcagggacgtatcctggttatgagcagcaactgaagacggagacctcgacgtccgccatg
ctgggccaaccgggagtggaccggcaagcaaagtggacctaccagtatgaatccacgacg
aaccggctgatggccaaggttcgaggtgggtacacctgggacttcacgacgggcttcggc
gcgcccgtttacaagtaccaggccactttctaccgcacctaccgcgcatgctcgggcgag
acgccagcggcggcggatccgcaggctcgcgtcgtcgaggtcgaagggccctgctgggtt
gcagccgaagactcgacgtcatgcttggattcgggccccctgactcaatacttctatggg
gcggcgaacgcgcccaacggccagcagcaacgcctgatccgcaagcgcgtctccgcgaac
gtcacgaaatccacgtctccgacgtgcagatactcgaactggctggaaacgacctatgac
gcctacgacgagcaggggcacctgctgcggacgacagaccctgcttatgtccggactcat
tatgcctacattgcgggcaagctggtccgaaagacagtgaagtcaagagggggagcattg
ccagacctcgtcacggactatggctatgacaatggccagcacggcgactacatccgctac
ccggatggccgctacgaggtgcagtgctaccgctcaggtgcatggaatgggtgcacgggc
ggtacgctgaccgacaagctccaatggaaagcgacggcaccgaccgcgaacggcctgaac
tacagcgagcgcgtgaactatttctaccagtacgggcgcctcgtcaaagaggagacgctg
gcggcggggggcggggttcgtgctcggaggacgtatgatgcggatccgctgggccgcccg
acgtaccagggcgtcggagaggagttggggggggcctcaaatggtgatttcacctactcg
tcgacgcgcctcttcgacccggagaacaacctgattcgtgagggtctgccgtacctcagc
agcgccggtcgtcctcctgcgttctgcggagggttcaacacgaccagcggggcgctcaat
gccctgccacccgaatgccgggccttcgaatacgaccggctcaaccggctggtgatgatg
ctggaggcggcggggccgatgggcgggagcgccccttccgccacgcatgtggcatacgac
gtggcagggaacgtccggagcatcaaacatggctgctccgcaggctccacgatgggcagc
tgcgggaaccagccagcggtggactacctccacgacgacttcgggaatctgttggaggtg
aagaccccatggggcgcgtccgcttcgtcaggtccgagcgtcacacggtttgcctatgac
tctctgggcaatccgacggtcaagcaaacgtcgcagatggctcagtccggaagctggacg
gcattttctcatgacgcgctcgggaggcttcgtgtggcggatgcccgccggagcacccag
acggagcggctcttccaaaccttctatgaagaccattttcccggtcttccttcggggtgc
ccggattcgcactacggtcagccgcactacacggtggattctttcggggcgacctggttc
cagtatgacgccttcggccggttgaccgcgaagttccgggttcgtggcgcggaaacaagc
ccaccttcgcgaccgtgcaacacgtcagcgtacgctcccggaaaggacagcccgaatcac
atcttcaactacgacctggctggccgtttggtgttcgaaatctatccgtatggccgtggc
atcgagtaccgttaccacgcagccagcacgggcatgccccaccgggtcagttcaatctac
gctgcccacctctatccgggaggagggtccagcatcgacccattgatcaccggcgtcgag
tgggagccctacggaggggtgaagagctactgggtccattcccgtggtgaaacgggtgta
cccaccgtggcgaagattcaataccaccagggcgggaagaacacggctttgggaaactgc
tcgcaaaccgctttctcccaggtcgtggatggggtcggtagtcctccgttcggacggctc
tccggcttgagcgtgacgcgggcaaacctgggagacgtcttcaagcggacctaccgttat
cgtgcggatctgttgctcgacgaggacacgtgcgttctccagagttcgagcactgccata
cccagcacgcaatactacggttctgagtcgggagcgtccgggtttgatgctcggctccag
ctgcgcaacgtcaccaactggccgaacaatagtccttgggcggatcagtcgatttcttat
acgtacgacgcgcgtggcaacaggacgagcgaaaactacagcggttcctcggtgcagtcg
gagtacaccagcgcctttccgaatgtggatcagcttgtcacgcgcaagtactcggcgccg
gcgtgtctgccgggtgcctgtctttcctatggcatcacagcccgttatcagcacgatatg
tcgggccgtgtgagcaatatgtcgtggtatctcagtcaaacggaaacccagccgtactac
tcgcttaccctcaacgcgaccacggcttctccaatggatttgggagcggtctaccggcag
gtttcgagcacccaactgggaggtcctggcagcaactacgaatacttctatgattccgtt
ggcaggcgccgcttgaagcgcagttgggatgggcgtgaagacgagtacttctactcgggg
acgcagttgctcgtggatgtcgggcagatttccgccaacccgagcacgacggactacgtg
ttggacgagtacgtctggctggatggccggccggtggcgctcatcaagtcccgcttcgcg
cattccccgttccttcggatggcggacaacacccaggattgttcgcgcttcggcgtggat
acggacgttccctgcggcacctacttcccggtgacggatggccttgggaagccagttctc
ctgctggactcgaaggggcggatcagtggcgtcggcgactacgagcccttcggtcacgtc
aaccggcgcactcacttcgcagccaaccagaacatgatgtactacccctatatggccaag
ctcaatgcgcccacgagcgcagggctgacgacccaggtgcgggcccgtcttgagtggatc
cagacgaacaagcaggggcgaatcatgctgacggatattgacggtgaaaccctgccagga
ttcggtagcggtgttggggaaatctcgggtggggtcaaggggcgggtgatgaccaggggg
tgggtggggacgccctctgacggcaccttctacgtgagccaggggccggacacgtccgat
gattggattcctacggtgggatatctcagcggcttcgaataccgccggttcgagccgaac
gcgaagccggtgtggctgcccctgcgtctgccgggccagtactacgatccggagacggac
ttgttcgagaactggaaccggtactacgacccgagtattgggcgctacttggcgccggag
ccgcttgcctctagcccgtccgcaatgctgagcggggccaaatctgggatgtcgatgttg
atgtattcatatgctcagaataatccgatttccatgaaagatgcggatgggaataaagtc
gcattcaatttgagtcacgatgatgtcattgccttgtttacggcaacggggctgactgtg
ggcgacctggacacgatgttcagggagaagattggggcgaaatacaaagctctcgctgat
gatgcgaattttgtggccaatgtgtggtcggttggtagttttggagccaaaacccaggcc
ctttggcgtgcgagagtcgatggggcgggaggggtgtcggagccaataaacgctggagcc
gcatcgatgtctgttgttgatttggggatggtttcgagcgccaagtatcaagccgcgttt
gcctctgcgaagttgggcgatgacccgctatggggcccgcctgtgtcgactacactgcct
gcgtacattgcacacgaactcggtcatgcttggtcgtacatgaatggacatctgccaggt
tcgcaggggtctattgatgctgctctggagttcgaggctgctgttcgtcctaagccgtgg
gtgccaagtctcttgggtccttctgttggtggtccccgcacaaaggagaagccgtga
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