Corallococcus coralloides: COCOR_03839
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Entry
COCOR_03839 CDS
T01780
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_03839 (phr)
Enzymes [BR:
ccx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
COCOR_03839 (phr)
DNA repair and recombination proteins [BR:
ccx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
COCOR_03839 (phr)
Prokaryotic type
COCOR_03839 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AFE09833
UniProt:
H8MR73
LinkDB
All DBs
Position
complement(4780634..4782046)
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AA seq
470 aa
AA seq
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MPEGISWSELGVDSARVQAVNEAPFPPGQRDFVLYWCMVNHRWEENHALDAAIALGNHLG
LPVVVYQAIRPDYPYASERLHAWALEGMADMAKGCTARGLPYWLELPRTKKEHKPRLASL
GRRAAAVVSDLFPTYIIPGHLRGAAKALRVPLIAVDASCVVPMQRIPAAQVGAYALRPKL
RKLWPEYLERTLPRRKVHVSGAKLQPDFELSDAVQARAALDTFALDHSVKPLSERGGRKA
GLKALDAFLDERLEGYDTGRNDPGLGQQSNLSPWFHWGNLFPGEAARAAIAAKGKDHPAV
QSFVEELLVRRELGFNYCFHTPGPKQLSVDSLPPWARETLSRHRKDPRPHLYSFEELDQG
RTQDALWNASQRELRERGRIHNYLRMLWGKKILEWSPTPEEALARIARLNDTYAVDGRDP
ASVSNFMWVLGLHDRPFQERAVIGKVRPMSSLRTAEKFDLGPYLERWGAR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcatctcgtggtccgaactcggcgtcgactccgcccgcgtgcaggcggtg
aacgaggcccccttccctccgggtcagcgcgacttcgtcctctactggtgcatggtgaac
catcggtgggaggagaaccacgcgctggacgccgccatcgcgctgggcaaccacctgggc
ctgcccgtcgtcgtgtaccaggccatccgcccggactacccctacgcgtcggagcggctc
cacgcgtgggccctggagggcatggcggacatggcgaagggctgcaccgcgcgtggcctt
ccgtactggctggagctgccgcgcacgaagaaggaacacaagccgcggctcgcgagcctg
ggccggcgcgcggcggccgtcgtgtcggacctgttccccacgtacatcatcccgggccac
ctgcgcggcgcggcgaaggcgctgcgggtgccgctcatcgccgtggatgcctcctgcgtg
gtgcccatgcagcgcatccccgcggcccaggtgggcgcgtacgcgctgcgccccaagctg
cgcaagctgtggccggagtacctggagcgcacgctgcccaggcgcaaggtccacgtgtcg
ggcgcgaagctccagccggacttcgagctgtccgacgccgtgcaggcccgcgccgcgctg
gacacgttcgcgctggatcattccgtgaagcccctctccgagcgcggcggacgcaaggcg
ggcctcaaggccctggacgcgttcctcgacgagcggctggagggctacgacaccggccgg
aatgatccgggcctgggccagcagtccaacctgtcgccctggttccactggggcaacctc
ttccccggcgaggcggcgcgcgcggccatcgcggcgaagggcaaggaccaccccgccgtg
cagtccttcgtggaggagctgctcgtgcgccgcgagctgggcttcaactactgcttccac
acgcccggcccgaagcagctgagcgtggactccctgcccccgtgggcgcgagagacgctg
tcgcgccaccggaaggatccgcgcccgcatctctattccttcgaggagctggatcagggc
cgcacgcaggacgcgctctggaacgcgtcgcagcgcgagctgcgggagcgcgggcggatc
cacaactacctgcgcatgttgtgggggaagaagatcctggagtggagccccacgccggag
gaggcgctggcccgcatcgcgcggctcaacgacacctacgcggtggacgggcgcgacccg
gcgagcgtctccaacttcatgtgggtcctggggctgcacgaccggcccttccaggagcgc
gcggtgattggaaaggtccggcccatgagctcgctgcgcaccgcggagaagttcgacctg
ggcccgtacctggagcgctggggcgcccggtag
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