Campylobacter coli RM4661: YSS_07380
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Entry
YSS_07380 CDS
T03166
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YSS_07380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccy03400
]
YSS_07380
Enzymes [BR:
ccy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YSS_07380
DNA repair and recombination proteins [BR:
ccy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YSS_07380
RecFOR pathway proteins
YSS_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
Sigma54_activat
AAA_14
nSTAND3
NB-ARC
Rad17
AAA_2
RNA_helicase
Sigma54_activ_2
T2SSE
HAMP_2
AAA_18
Mg_chelatase_C
AAA_PrkA
TsaE
NACHT
NADH-UOR_E
Motif
Other DBs
NCBI-ProteinID:
AHK77315
LinkDB
All DBs
Position
1389179..1390189
Genome browser
AA seq
336 aa
AA seq
DB search
MDRIVEIEKYSFDETYETSLRPSNFDGYIGQENIKKNLNVFISAAKKRNECLDHILFSGP
AGLGKTTLANIISYEMGANIKTTAAPMIEKSGDLAAILTNLSEGDVLFIDEIHRLSPAIE
EVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGMLSNPLRDRFGMQFRLEF
YKDEELAIILQKAALKLNKSCENEAALEIAKRSRSTPRIALRLLKRVRDFADVNDEETIT
KERAKEALNSLGVNELGFDAMDLRYLELLTEAKRKPIGLSSIAAALSEDENTIEDVIEPY
LLANGYIERTAKGRIASTKSFSVLKLNYEQTLFDEN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatagtagaaatagaaaaatattcttttgacgaaacttatgaaacttctctg
cgtccttcaaatttcgatggctacataggacaagaaaacattaaaaaaaatttaaatgtt
tttattagcgctgcaaaaaaaagaaatgaatgcttagaccatatactttttagtgggcct
gcaggacttggcaaaactacattggctaatattatttcttatgagatgggtgcaaatatc
aaaacaactgcggctcctatgatagaaaaaagcggggatttggctgcaattttaaccaat
ttaagcgaaggagatgtgctttttatcgatgaaattcatcgcttaagccctgctattgaa
gaagtactttaccctgcaatggaagattataggctagatatcatcatcggtagtggccct
gcagcacaaactataaaaatcgatttgcctaaatttacacttattggtgctacaacccgt
gcaggaatgcttagcaatcctttaagagatcgttttggaatgcaatttagacttgaattt
tataaagatgaagagcttgctatcatacttcaaaaagctgcactaaagctcaataaaagc
tgtgaaaatgaagctgcacttgagattgccaaaagaagtcgctctacccctagaatcgca
cttagacttttaaaaagagtgagagattttgcagatgtaaatgacgaagaaacaatcacc
aaagaaagggctaaagaagcattaaattctttaggtgtcaatgagcttggttttgatgcg
atggatttaagatatctagagcttttaacagaggctaaaagaaagcctataggactttct
agcatagcggcagctttgagtgaagatgaaaatactattgaagatgtaatcgaaccttat
ttgcttgcaaatggctacatagaacgcactgccaaaggtcgtatagcaagtacaaaaagt
tttagtgtacttaagcttaattacgaacaaactttatttgatgaaaattga
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