Clostridioides difficile CD196: CD196_1476
Help
Entry
CD196_1476 CDS
T00997
Name
(GenBank) putative phage cell wall hydrolase
Organism
cdc
Clostridioides difficile CD196
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
Amidase_5
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
CBA62832
UniProt:
A0A0H3N1Z5
LinkDB
All DBs
Position
1717093..1718970
Genome browser
AA seq
625 aa
AA seq
DB search
MLANDRDVRLVIAHWEDFYEPAVIDGITWEIERRGTPSKLEFTIVMDDILEFCEGNSVRL
YYKGIGIFYGYIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYSNKTASELVKILAKDFNL
KYNVIEDTKYKISRVEENKTLFDMILTALDDTLREKKEMYTLYDDFGRITLKNVASMKLD
TVMNNDVIEDFDYNSSIDSDTYTKIKLVRDNEESGKRDVYIAQDSAHMRSWGILQMFDTV
DKNMSEAEIKQKCDILLKLYNKKTKSLSLKNALGDIRVRAGCLVPVFLNLGDIELQNYML
VEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKDEKKNGPAQSIMKKNTGKK
VPAIFTAYYPGNNAMEGGKTDCNGKPLDVKSRTVAGPMNREGVKKTWYTDDFLNKHPVFE
YGDKVKIILPGTAYDNKVYTVKDNGGRIYVETNGTYHIDILLANASECKKFGRKNGYIII
GGDEEQTYQVEGNNQSNTNNNSKEDKLISIAKSKLGCNYVYGAEGPNNFDCSGFTQWCYK
QIGIKIPRTASAQSKAGKAVDLKDRSKWKAGDLLCRIGGGSSNHVVMYIGNNQIIHSPQT
GDVVKIESVNSYRKGKAYTHVRRFI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgttagcaaatgatagagatgtaagattagtaatagctcattgggaagatttctacgaa
cctgctgtcattgatggtatcacatgggagatagaaagacgaggtacaccttctaagtta
gagtttacaatagtcatggatgatatactagagttttgcgaaggaaattctgtaaggctg
tattataaaggaataggcatattttatggatatatatttcaaaagaaaagagataaagaa
aatcacattaaaattgttgcttacgaccagttgagatattttaagaataaagatacttat
gtatatagtaataaaactgcaagtgaacttgtaaaaatcttggctaaagattttaattta
aaatacaatgtcatagaagatactaagtataaaatatctagagtcgaagaaaataaaaca
ctctttgacatgatactaacagcactagatgatactttaagagagaaaaaagaaatgtat
accttgtatgatgattttggaagaataacattaaagaatgttgcatcaatgaaactagat
actgtcatgaacaatgatgtaattgaggattttgactataattcatcaatagatagtgat
acttacacaaagattaaacttgtaagagacaacgaggagtcaggaaaaagggatgtatat
attgctcaagactcagctcacatgagaagttggggaatacttcaaatgtttgatacagta
gacaaaaacatgagtgaagcagagataaaacaaaagtgtgatatacttctaaaactatat
aataagaaaactaagtcattaagtttaaaaaatgcacttggagatattagagtgagagca
ggttgtttagtacctgtttttttaaatctaggagatattgaattgcaaaattatatgtta
gttgagaaagtaaaacatacatttgaaaataattcacatttcatggatttgaccttggtt
gatggagacgaatttgcttcatattcttcaagctcatatagtagtggaaatactaataat
aaagatgaaaagaaaaatggtcctgcacaaagtattatgaaaaaaaatacaggtaaaaaa
gttcctgctatatttactgcatattatccaggaaacaatgcaatggaaggtggaaaaaca
gattgcaatggaaagccacttgatgtaaaatcaagaactgttgctggtccaatgaatcga
gaaggagttaagaaaacttggtatactgatgattttctaaataaacatccagtttttgaa
tatggagataaagtaaaaattatacttcctggtactgcctatgacaacaaagtatataca
gttaaagataatggaggaagaatatatgttgaaacaaacggaacatatcatatagatata
ctattagctaatgctagtgaatgtaaaaaatttggtagaaagaatggctatataattata
ggtggagatgaagaacaaacatatcaagttgaaggtaataaccaaagtaatacaaataac
aattctaaagaagataaattaattagtatagcaaaaagtaaactgggttgtaattatgtg
tatggagcagaaggtcctaataattttgattgcagtgggtttactcaatggtgttataaa
caaataggtataaaaattcctcgtactgcttctgcacaaagtaaagcaggaaaagcagta
gatttaaaagatagaagcaagtggaaagcaggagacttattatgtagaattggtggagga
agtagtaatcatgttgtaatgtacattggaaacaatcaaataattcattcaccacaaaca
ggagatgtggtaaaaatagagtctgttaattcttatagaaaaggaaaagcatacacacat
gtgagaagatttatataa
DBGET
integrated database retrieval system
