Clostridioides difficile CD196: CD196_2035
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Entry
CD196_2035 CDS
T00997
Name
(GenBank) probable amino-acid ABC transporter, ATP-binding protein
KO
K16963
putative S-methylcysteine transport system ATP-binding protein
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD196_2035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_2035
Transporters [BR:
cdc02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Putative S-methylcysteine transporter
CD196_2035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_23
ABC_ATPase
AAA_13
AAA_29
AAA_16
AAA_30
AAA_15
RsgA_GTPase
ATPase_2
AAA_22
nSTAND1
AAA_19
nSTAND3
AAA_10
Adeno_IVa2
DUF87
Rad17
BCA_ABC_TP_C
AAA_28
AAA_5
Mg_chelatase
PRK
AAA_14
AAA_24
AAA_18
NACHT
MMR_HSR1
AAA_25
AAA_11
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
CBA63904
UniProt:
A0A0H3N3K3
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Position
complement(2353379..2354128)
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AA seq
249 aa
AA seq
DB search
MIKVENLHKSFKGTEVLKGINLEINQSEVVAILGPSGTGKSTLLRCLNYLVEPTKGKIMI
GDVKVDVEKATKKDIANLRKHTSMVFQNYNLFKNKTALENVMEALIVVHKKSNKEAREIS
LKLIDKVGMLDRKDFYPSKLSGGQQQRIGIARAMAVNPNVILFDEPTSALDPELVGEVLS
VIKSLAKEGITMLIVTHEINFAKEVADKIIFMDNGVIAEEGTPDEIFNNPKNERTAKFLN
IVRKEEVFS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagtagaaaatttacataaaagttttaaagggacagaagttcttaaaggtata
aatttagagataaatcaaagtgaagtagtagctatacttggaccatctggaacaggtaaa
tctacgttacttagatgtttaaattatttagttgagcctacaaaaggaaagataatgatt
ggtgatgtaaaagtagatgtagaaaaagcaacaaaaaaagatatagccaatttaagaaaa
catacatctatggtatttcaaaattataacttatttaaaaataaaacagcattagaaaat
gtaatggaggcattgatagtagtacataaaaagagtaataaagaagctagagaaatatct
ttaaaattaatagataaagtaggtatgttggataggaaagatttttatccatcaaaattg
tctggggggcagcaacaaaggataggtatagcaagagcgatggcagtaaatccaaatgta
atattatttgatgagccaacatctgcacttgacccagaacttgttggagaagttttaagc
gttataaaatcgcttgcgaaagaaggaataacaatgcttattgtaactcacgaaataaat
tttgcaaaagaagttgctgataaaattatatttatggataatggtgtaatagctgaagaa
ggaactcctgatgaaatatttaataatcctaaaaatgaaagaactgcaaaatttttaaat
atcgttaggaaagaagaagtatttagttaa
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