Clostridioides difficile CD196: CD196_3182
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Entry
CD196_3182 CDS
T00997
Symbol
hymB
Name
(GenBank) putative iron-only hydrogenase,electron-transferring subunit
KO
K00335
NADH-quinone oxidoreductase subunit F [EC:
7.1.1.2
]
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc00190
Oxidative phosphorylation
cdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CD196_3182 (hymB)
Enzymes [BR:
cdc01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.2 NADH:ubiquinone reductase (H+-translocating)
CD196_3182 (hymB)
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Gene cluster
GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
Fer4
2Fe-2S_thioredx
Fer4_6
SLBB
Fer4_7
Fer4_2
Fer4_9
Fer4_10
Fer4_21
Fer4_8
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
CBA66445
UniProt:
A0A0H3N6M6
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Position
3769098..3770984
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AA seq
628 aa
AA seq
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MRKVNSFDELKVLADELKPNLSLRKNYSKENVLRRELLVCCDTGCTSSNSLEIVSELENE
IKKSGIQDKVSVRLTGCFGFCAQGPIVKVYPDNVFYVKVEPSDAEKIVQSHLIRNTVVEE
LLYEEESLSKKVEEQEEMSFYKKQLRIALKNCGLIDPDSIEEYIANDGYLALGKCLTSLT
PQEVIAEVKTSGLRGRGGAGFPTGSKWEAASKNPAGPTDKKFVVCNADEGDPGAFMDRSV
LEGDPHSVLEAMAICGYAIGSDTGYIYIRAEYPKSIERLKVAIAQAEKYGLLGENILGTG
FNFKLELKYGAGAFVCGEGTALMHSIEGRRGEPRMKTYSSSKSGLWKSPTCLNNVETFAN
IPAIILKGGDWFANLGTEDSSGTKVFALGGKVENVGLVEVPMGTTLRDIVFEIGGGIPEG
KKFKAVQTGGPSGGCIPTEHLDTPIDFGSLSSIGSMMGSGGMLVLDESDCMVDIAKFFLE
FTVEESCGKCTPCRIGTTRLLEILTKITEGNGTLQDLDDLENLAETIQTASLCGLGKAAP
NPVLSTLQYFKDEYIAHVVDKKCPAGKCQNLLSYFITDDCKGCTKCSRVCPAGCITGSVK
EQHTIDTSKCLKCGACIDNCTFNAIIKK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaagtaaattcatttgatgaattaaaagttttagctgatgagctgaaacctaat
cttagcttaagaaaaaattattctaaggaaaatgtattaagaagagaattacttgtttgt
tgtgatactggatgtacctcttcaaacagtctagaaatagttagtgaattagaaaatgaa
ataaagaaatcaggaatccaagataaagttagtgttcgtttgacaggttgttttggtttc
tgtgctcaaggtcctattgtaaaagtttatcctgataacgttttctacgtaaaagttgag
ccatctgatgctgaaaagatagttcaaagccacttaattagaaatacagttgtcgaggaa
ttattatatgaggaagaatctttaagtaaaaaagttgaagaacaagaagaaatgtctttc
tacaaaaaacagttacgtatagctttaaaaaattgtggtcttatagacccagatagtata
gaagaatatattgccaatgatggttatttagctctaggcaaatgtttaacttctcttact
cctcaagaagttattgcagaggtaaaaacttctggccttcgtggtagaggtggtgcaggt
ttccctactggctctaaatgggaagctgcttcaaaaaatccagctggtccaacagataaa
aagtttgttgtatgtaatgctgatgaaggtgacccaggtgcatttatggatcgatctgta
cttgaaggtgaccctcatagtgtactagaagctatggcaatatgtggatacgctataggt
tctgatacaggatacatatacataagagcagaatatccaaaatctatagaaagattaaaa
gtagccatagctcaagctgaaaaatacggtttacttggcgaaaatatcttaggcactgga
tttaactttaaattagaattaaaatatggtgcaggtgctttcgtttgtggtgaaggtaca
gcgctaatgcattcaattgaaggtagacgtggtgaacctagaatgaaaacttatagttct
tctaagagtggtctatggaaatctcctacttgcttaaataacgttgagacttttgctaac
atacctgcaattatacttaagggtggagattggtttgccaacttaggtactgaagattct
agtggtactaaagtctttgctcttggtggaaaagtagaaaatgtaggacttgttgaagtt
ccaatgggtactactttaagagatattgtatttgaaattggtgggggaatccctgaaggt
aagaaatttaaggctgttcaaacaggtggaccatctggtggatgtataccaactgaacat
ttagacactcctatagactttggttcattaagttctatcggttcaatgatgggctctggt
ggtatgcttgttcttgatgaatctgactgtatggtagatatagccaagttcttccttgag
tttactgttgaagaatcttgtggtaaatgtacaccttgtcgtataggtactacaagatta
ttagaaatattaactaaaattacagaaggtaatggtactctacaagatttagatgaccta
gaaaaccttgctgaaactatacaaactgcttcattatgtggtcttggtaaagctgctcca
aaccctgttttaagtactcttcaatatttcaaagatgagtatatagctcatgttgtagat
aagaaatgtcctgctggtaaatgtcagaacttactttcttactttataacagatgactgt
aagggttgtacaaaatgttctagagtgtgtcctgctggttgtataacaggttctgttaag
gaacaacatacaatagatacttctaagtgtctaaaatgtggtgcttgtatagataattgt
acatttaacgctataatcaagaaataa
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