Clostridioides difficile 630: CD630_13250
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Entry
CD630_13250 CDS
T00487
Name
(GenBank) putative tRNA 2-selenouridine synthase,selenophosphate-dependent; Rhodanese-like domain protein
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
cdf
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdf03016
]
CD630_13250
Enzymes [BR:
cdf01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
CD630_13250
Transfer RNA biogenesis [BR:
cdf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CD630_13250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
AAA_18
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAJ68183
UniProt:
Q18BI8
Structure
PDB
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All DBs
Position
1536707..1537765
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AA seq
352 aa
AA seq
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MSVIKIEKALKLDKVIFVDVRTEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEA
IQKGFDYVSYKLKDIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSLGVNVYQLEGG
YKAYRNFVLEYLRHVMDTKNFVSVHGLTGTGKTDLLHLLDENGIDVLDLEGIAKNSGSTF
GFITFDKKPPSQKNFETKLFESIFFSKENYIFVESESKRVGSVTVPNEIFEAMTREGHHI
LLECDIENRVDRLCRDYIYDKDEGNILILKECINKFRKRLGNKVVDDYIDLLESGEYKEL
VKRYLLEYYDPLYMHSVEKYKYSKIINFNDTQKALEDVIDLYESILEGESEC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagttataaaaatagaaaaagcacttaagctagataaagtaatatttgtagatgtg
agaactgaaggagaatatgaagaagaccatatattgaatgcaatcaatatgcctcttttt
aaaaataatgaacataatgaagttggaacaatttataagatgcagggaaaacatgaagca
atacaaaaagggtttgactatgtatcgtataaattaaaggatatatatttacaagcagca
gaacttgcattaaattatgataatattgtcatatattgtgcaagaggcggaatgagaagt
ggaagtatagtaaatttattatcatcattaggtgtaaatgtatatcaacttgaaggtgga
tataaggcttatagaaattttgttttagagtatttaaggcatgtaatggatacaaaaaac
tttgtatctgttcatggattgactggtacaggaaagactgatttgttacatttattagat
gaaaacggaatagatgtactggatttagaaggcatagctaaaaacagtggttctaccttt
ggttttataacttttgataaaaagccaccatctcaaaagaactttgaaacaaaactattt
gaaagtatatttttttcgaaagagaattatatatttgtcgagagtgaaagcaaacgagtt
ggaagtgttacagttccaaatgaaattttcgaggcaatgacacgagaaggacatcatata
ttattagaatgtgatattgaaaatagagttgatagactttgtagagattatatttatgat
aaagatgaaggtaatatattgattttaaaagaatgtataaacaagtttagaaaaagattg
ggtaataaagtagtagatgattatattgatttattagaatcaggtgaatataaagaactt
gtaaaaagatatcttttagaatactacgacccactttatatgcattcagtagagaaatat
aagtatagtaagattataaattttaatgatacacaaaaagctttagaagatgttatagac
ttatatgagagtatattggaaggagaaagtgaatgttaa
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