Camelus dromedarius (Arabian camel): 105084848
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Entry
105084848 CDS
T04642
Symbol
COL11A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XI) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04820
Cytoskeleton in muscle cells
cdk04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105084848 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105084848 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cdk00536
]
105084848 (COL11A1)
Glycosaminoglycan binding proteins [BR:
cdk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105084848 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
105084848
NCBI-ProteinID:
XP_031313370
LinkDB
All DBs
Position
9:complement(10102488..10298390)
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AA seq
1811 aa
AA seq
DB search
MERWSSRWKTKRWLWDFTITTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGF
CTNRKNSEGSDTAYRVSKQAQLSAPTKQLFSGGTFPEDFSILFTIKPKKGIQSFLLSIYN
EHGIQQLGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIV
DCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQLLITGDPKAAYDYCEHYS
PDCDNSAPRAAQAQEPQVDEYAPEDIMEYDYEYGEAEYKEAESVTETPTVTEETITQTEA
NIVDDFQEYNYGTVESYQTEAPRRVSGPNEPNPVEEVFTEEYLTGEDYDSQRKNSEDTLY
ENKEIDGRDSDLLVDGDLGEYDFYEYKDYEDKPTSPTNEEFGPGVPAETDITETSINGHG
AYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPSGPPGDPGERGPPGRPGLP
GADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRP
GPVGGPGSSGAKGEAGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDR
GFDGLPGLPGDKGHRGERGPQGPPGPPGEDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTP
GPIGQPGIAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKP
GLAGLPGADGPPGHPGKEGQSGEKGSLGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEK
GEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVP
GLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKP
GPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKT
GPPGPGGVVGPQGPTGGLAQXRTWNPGPRPSGEQGLPGAAGKKGQRCSLQGLFLGDPGPQ
GVSGKDDQQEYAGFPGERGLPGAQGAPDXKGRRSQGPPGPVGSPGERGSAGTAGPIGLPG
RPGPQGPPGPAGEKGAPGEKGPQGPAGRDGTQGPVGLPGPAGPAGSPGEDGDKGEIGEPG
QKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG
PIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGGVGEKG
EPGDAGNPGPPGEAGPGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPG
DPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQG
EKGAKGEAGAEGPAGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMG
PPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSAGAKGDGGIPGPAG
PIGPPGPPGLPGPQGPKGTKGSTGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTR
RHAEGMQADAGDNILDYTDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHP
DFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRLSSWPKEKPGSWFSEF
KRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYNCHQSVAWYDVSSGSYDKALRFL
GSNDEEMSYDNSPYIRALSDGCASRKGYGNTVIEINTPKIDQVPIVDVMINDFGDQSQKF
GFEVGPVCFLG
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtggtcctctaggtggaaaacgaaacggtggctgtgggatttcaccattaca
actctcgcattgactttcctcttccaggctagagaagtcagaggagctgctccagtcgat
gtactaaaggctctagattttcacaattctccagagggaatatcaaaaacaacgggcttt
tgcacaaacagaaagaattcagaaggttcagatactgcttacagagtttcaaagcaagca
caactcagtgccccaacaaaacagttattctcaggaggaacttttccagaagatttttca
atactatttacaataaaacccaaaaaaggaattcagtctttccttttgtctatatataat
gagcatggtattcagcagctcggtgttgaggttgggagatcaccggttttcctgtttgaa
gaccataccgggaaacctgccccagaagactatcccctcttcagaactgttaacattgct
gatgggaagtggcatcgggtagcaatcagcgtggagaagaaaactgtgacaatgattgtt
gattgtaagaagaaaaccacaaaacccctcgacagaagtgagagagcaatcgttgacacc
aatggaatcacggtttttggaacaaggattttggatgaagaagtttttgagggggacatc
cagcagttgctgatcacgggggaccccaaagcagcgtatgactactgcgagcattacagc
ccggactgtgacaactccgcgcccagggccgctcaggcccaggaaccgcaggtggatgag
tatgcacctgaggatataatggaatatgactatgagtatggggaagcagagtataaggag
gctgagagtgtaacagagacacccactgtaactgaggagacaataacccaaaccgaggcg
aatattgttgatgattttcaagaatacaattatggaacagtggaaagttaccagacagaa
gctcctaggcgtgtatccggaccaaatgagccaaatccagttgaagaagtatttactgaa
gaatatctaactggagaggattatgattcccagaggaaaaattccgaggatacgttatat
gaaaacaaagaaatagacggcagggactctgatcttctggtagatggagatttaggcgaa
tatgacttttatgaatataaagactatgaagataaaccaacaagccccactaacgaagaa
tttggtccaggtgttccagcagaaacagatattacagaaacaagcataaatggccatggt
gcatatggagaaaaagggcagaaaggagaaccagcagttgttgaacctggcatgcttatt
gaaggaccaccagggccagcaggacctgcgggtcttatgggtcctccaggtctacaaggc
cccagtggacccccgggtgaccctggcgagaggggtcccccaggacgtcctggtttacca
ggggctgacggactacctggtcctcctggtaccatgttaatgttaccgtttcgttatggt
ggcgatggttccaaaggaccaaccatctctgctcaggaggctcaggcccaggccattctt
cagcaggctcggattgctctgagaggtccacctggcccaatgggtctaactggaagaccg
ggtcctgtgggggggcctggttcctctggggccaaaggtgaggctggtgatccaggtcct
cagggccctcgtggtgtccaaggtcctccaggtccaacaggaaaacctggaaaaaggggt
cgtccaggtgctgatggaggacgaggaatgcccggagaacccggggcgaagggggatcga
ggatttgatggacttccaggtctgccaggtgacaagggtcataggggtgaacgaggtccc
caaggtcctcccggtcctcctggtgaagatggaatgaggggagaagatggagaaatagga
ccaaggggtcttccaggtgaagctggtccacgaggtttgctgggaccaaggggaactcca
ggacctatagggcagcctggtattgcaggtgtggatggccccccaggaccaaaagggaac
atgggtccccaaggggagcctggaccaccaggtcagcaggggaatccaggacctcagggt
cttcctggtccacaaggtccgattggtcctcctggggaaaaaggaccacaaggaaaacca
gggcttgcaggacttcctggtgctgacgggcctcccggtcaccctggaaaagaaggccag
tctggagaaaagggttctctgggtcctcctggcccacaggggcctattggctaccctggt
ccccgaggagtaaagggagcagatggtgtcagaggtctcaagggctctaaaggtgaaaag
ggtgaagatggattcccaggattcaaaggtgacatgggtctcaaaggtgacagaggagaa
gttggtcaagtgggtccaagaggagaagatggccctgaaggccccaaaggtcgagctggc
ccaactggagaccctggtccttctggtcaagcaggagagaaggggaaacttggtgtgcca
ggattaccaggatatccaggaagacaaggtccaaagggttccactggatttcctgggttt
ccaggtgccaatggagagaaaggtgcacggggcgttgctggcaaaccaggccctcggggt
cagcgaggtccaacgggtcctcgaggttcgagaggtgcgaggggtccaactgggaaaccc
ggtcccaagggcacttcaggtggtgatggtcctcctggccctcctggtgaaagagggcct
caaggaccccagggtccagttggattccctggaccaaaaggtcctcctggaccacctggg
aaggatggcctgccgggacaccctgggcaacgtggggagactggatttcaaggcaagact
ggccctcctggtccaggaggtgttgttggaccacagggaccaactggtggactggcccaa
tagcgaacgtggaatcctggccctcggccctccggcgagcaaggtcttcctggtgctgca
ggaaagaaggggcaaaggtgcagtcttcaaggacttttcttgggtgacccaggtcctcaa
ggcgtctcagggaaagatgaccagcaggaatacgcgggtttcccaggtgaaagaggactt
cctggagctcagggtgcaccggactgaaaggggagaaggtcccagggcccaccaggtcca
gttggctcaccaggagaacgtggatcagcaggaacagctggcccaatcggtctaccaggg
cggccaggacctcagggtcctcctggtccagctggagagaaaggtgctcctggagaaaaa
ggtccccaaggccccgcagggagagatggaacacaaggccccgtgggtctcccggggccc
gctggccctgctggctcccctggagaagatggagacaagggtgaaattggtgaaccagga
caaaaaggcagcaagggggacaaaggagaaaatggtcctcccggtcccccaggtcttcaa
ggtccagttggtgcccctggaattgctggaggtgatggtgagccaggtcccagaggtcag
cagggaatgtttggacagaaaggtgatgagggtgccagaggcttcccaggacctcctggt
cccataggtctgcagggtctgccaggcccacctggtgaaaaaggtgaaaatggggatgtt
ggccccatgggtccacctggtcctccaggcccaagaggccctcaaggtcccaacggagct
gatggaccacaaggacctccaggatccattggttcagttggtggtgttggagaaaagggt
gaacctggggacgcggggaacccagggcctcctggagaagcaggcccaggtggtcccaaa
ggagaaagaggagagaaaggagaagctggtccgcctggagctgcgggacctcctggtgct
aagggaccaccaggtgacgatgggcctaagggtaacccgggtcctgttggttttcctgga
gatcctggtcctcccggggaacccggccctgcaggtcaggatggcgttggtggtgacaag
ggtgaagacggagatcctggtcagccgggtcctcctggcccatctggtgaggctggccca
ccaggtcctcctggaaaaagaggtcctcctggtgctgcaggtgcagagggaagacaaggt
gaaaaaggcgctaagggagaagcaggagctgaaggtcctgcaggaaaaactggcccagtt
ggtcctcagggacctgctggaaagcctggcccagagggtcttcggggcatccctggccct
gtgggagagcaaggtctccctggagctgcaggccaagatgggccacctggtcctatggga
cctcctggcttacctggtctcaaaggtgaccctggctccaagggtgagaagggacatcct
ggtttaattggcctgattggtcctccaggagagcaaggtgaaaagggtgacaggggactc
cctggaactcaaggatctgcaggagcaaaaggggacggaggaattccaggtcctgctggt
cccataggtccacctggtcccccaggcttaccaggtcctcaaggtccaaagggtaccaaa
ggctcaactggacctgctggccagaagggtgacagtggtcttccaggacctccagggcct
ccgggtccgcctggtgaagtcattcagcctttaccaatcttgtcacccaaaaaaacgaga
agacatgcagaaggcatgcaggcagatgcaggagataatattctggattacactgatgga
atggaggaaatatttggttccctcaattccttgaaacaagacattgagcatatgaagttt
ccaatgggcacgcagaccaacccagcccgaacttgcaaagacctgcagctcagccatcct
gacttcccagatggtgaatattggattgatcctaaccagggttgctcaggagattccttc
aaagtttactgtaatttcacgtctggtggtgagacttgcatttatccagacaaaaaatcg
gagggagtgagactttcatcatggccaaaggagaaaccaggaagctggtttagtgaattt
aagagaggaaaactgctttcatatttagatgttgaaggcaattccattaatatggtgcaa
atgacattcctgaaactgctgaccgcctctgcgcggcaaaatttcacctacaactgtcat
cagtcagtagcctggtatgacgtgtcctcagggagctatgacaaagcccttcggttcctg
ggatcaaatgacgaggaaatgtcctacgacaacagcccttacatcagagccctgtctgac
ggctgtgcgtcaagaaaaggctatggaaatactgtgattgaaatcaacacaccgaaaatt
gatcaagtacctatcgttgatgtgatgatcaatgactttggtgaccagagtcagaagttt
ggatttgaagttggtcctgtttgtttccttggctaa
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integrated database retrieval system
