Clostridioides difficile R20291: CDR20291_1159
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Entry
CDR20291_1159 CDS
T00998
Symbol
comR
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDR20291_1159 (comR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdl03019
]
CDR20291_1159 (comR)
03016 Transfer RNA biogenesis [BR:
cdl03016
]
CDR20291_1159 (comR)
Enzymes [BR:
cdl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDR20291_1159 (comR)
Messenger RNA biogenesis [BR:
cdl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDR20291_1159 (comR)
Transfer RNA biogenesis [BR:
cdl03016
]
Prokaryotic type
tRNA degradation factors
CDR20291_1159 (comR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
DUF1773
Med29
ALS_ss_C
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
CBE03500
UniProt:
A0A9R0BJI8
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All DBs
Position
1383345..1385456
Genome browser
AA seq
703 aa
AA seq
DB search
MFEHKIFKMDFAGRELSVEIGKICEMASGSCIVRYSDSMVMVNTTKSAKPRDGIDFFPLS
VDYEEKLYSVGKIPGGFLKREGKPSEKAILTSRLIDRPIRPLFPKGFRNDVQVVATVLSV
DQDCTPDIVAMIGSSIALSISDIPFNGPTGSVCVGLVDGAFVVNPNAEQREKSSMHLVVS
GTKEAIMMVEAGADEVPDEVMLDAILFAHQEIKKIVEFIEGIVAEVGKEKMPVELYHAGE
EITQLVREFATDKMKKAVQTFEKLERMENMDRVKEETLAHFEETLEDFEDFVGDIEEVLQ
DIIKEEVRKLIVHENVRPDNRKLEEIRPIWCETGMIPRAHGSAIFTRGQTQVLNVATLGA
LGDVQKLDGLDEEENKRYMHHYNFPAYSVGEARPSRGPGRREIGHGALAERALLPVIPSQ
EEFPYAIRLVSEVLSSNGSTSQASVCGSTLSLLDAGVPIKDMVAGIAMGLIKHDGKVAVL
SDIQGMEDHLGDMDFKVAGTEYGITAIQMDIKIDGIDKEILQRALKQAKEGRIHILGEMR
KTISQPKPELSPYAPKIVKMQINPDKIKDVIGPGGKIITKIIDETGVKIDIEQTGEVFIS
GIEIDMIKKAQELINNIVVEPEVGKTYKGKVSRIMNFGAFVEILPGKEGLLHISHIAHER
VAKVEDVLNIGDEVEVKVTEIDEKGRVNLSRKVLLPKPEHKNK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacataaaatatttaaaatggattttgcaggaagagaactttctgtagaaata
ggaaagatttgtgaaatggctagtggtagttgtatagttcgatacagtgacagtatggta
atggtaaatacaactaaatcagccaaacctagagacggaatagacttttttcctttaagt
gtggattatgaagaaaaattatactctgtaggtaagatacctggaggttttttaaagaga
gaagggaagccttcagaaaaagctatacttacatcaagattgatagatagaccaataaga
cctttattcccaaaaggatttagaaatgatgttcaggtagttgcaacagttctatcagta
gaccaagattgtacaccagatatagtagcaatgataggttcttcaatagccctttctata
tcagacataccatttaatggaccaacaggttcagtatgtgttggccttgtagatggtgca
tttgttgtaaatccaaacgcagagcaaagagaaaaaagttcaatgcatctagttgtttca
ggtacaaaggaagcaataatgatggttgaagccggagctgatgaagttccagatgaggta
atgcttgatgctattttatttgctcaccaagaaataaaaaaaatagttgagtttatagaa
ggtatagttgcagaagttggaaaagaaaaaatgcctgttgaattataccatgcaggagaa
gaaataactcaattggttcgcgaatttgcaactgataagatgaaaaaagcagttcagact
tttgaaaagttagagagaatggaaaatatggatagagttaaagaagaaactttagctcac
tttgaagaaactttagaagattttgaagattttgttggagatatagaagaagtattacaa
gatataataaaagaagaagtaagaaaacttatagtacatgaaaatgtaagaccagataat
agaaaacttgaagaaataagacctatatggtgtgaaactggcatgatacctagagctcat
ggttcagccatatttactagaggacaaactcaagtacttaatgttgctactttaggtgct
ttaggagatgttcaaaaattagatgggttagatgaagaagaaaacaagagatatatgcat
cattataatttccccgcatatagtgttggagaagctagaccatcaagaggaccaggaaga
agagaaataggacatggtgctttagcagaaagagctttattaccagtaataccatctcaa
gaagaatttccttatgctattagattagtttctgaagtattaagttcaaatggttctaca
tctcaagcaagtgtatgtggctcaacattatctttacttgatgcaggtgtacctataaaa
gatatggttgcaggtatagcaatgggacttataaagcatgatggtaaggttgcagtgctt
tcagatatacaaggtatggaagaccatttaggcgatatggactttaaagtagctggaaca
gagtatggtataacagcaatacaaatggatataaaaattgatggtatagataaagaaatt
ctacaacgtgctttaaaacaagctaaagagggtagaatccatatactaggagagatgaga
aaaactatatctcagccaaaaccagaactttcaccatatgcacctaagattgttaaaatg
caaataaatcctgacaagataaaagatgtaatagggcctggtggaaagataataactaag
ataatagacgaaactggagttaagatagatattgaacaaactggggaagtatttatatca
ggtattgagattgatatgattaagaaagctcaagaacttataaataatatagtagttgaa
ccagaagtaggaaaaacttataaaggtaaggtaagtagaataatgaactttggagcattt
gttgaaatacttccaggaaaagaaggattacttcatatatctcatatagctcatgaaaga
gttgccaaagttgaagatgtattgaatataggggatgaagttgaagttaaagttacagag
attgatgaaaaaggaagagttaatttatcaagaaaagttcttttaccaaaaccagaacat
aaaaataaataa
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