Clostridioides difficile R20291: CDR20291_2628
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Entry
CDR20291_2628 CDS
T00998
Symbol
aspS
Name
(GenBank) putative aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDR20291_2628 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cdl01007
]
CDR20291_2628 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdl03016
]
CDR20291_2628 (aspS)
03029 Mitochondrial biogenesis [BR:
cdl03029
]
CDR20291_2628 (aspS)
Enzymes [BR:
cdl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CDR20291_2628 (aspS)
Amino acid related enzymes [BR:
cdl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CDR20291_2628 (aspS)
Transfer RNA biogenesis [BR:
cdl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CDR20291_2628 (aspS)
Prokaryotic type
Other AARSs
CDR20291_2628 (aspS)
Mitochondrial biogenesis [BR:
cdl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CDR20291_2628 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
PUA_2
Motif
Other DBs
NCBI-ProteinID:
CBE06101
UniProt:
A0A9R0BMB6
LinkDB
All DBs
Position
complement(3091477..3093264)
Genome browser
AA seq
595 aa
AA seq
DB search
METLKGLKRTHYCGELREKNINEEVVLMGWVQKKRNLGGLVFVDLRDTSGLCQIVFDTDV
DKEAFEKAEKLGAEFVIAVKGKVCERQSKNPNMPTGDIEIFATELRLLNKSETPPIYIKD
DDDVSEALRLKYRYLDLRKPSMQRNLKLRHKVMNITRNYLSNNRFCEIETPFLIAPTPEG
ARDYLVPSRVNPGKFYALPQSPQLYKQLLMVSGMDRYFQIVKCFRDEDLRADRQPEFTQI
DCEMSFVEQEDVMSMIEGLLEAIFKEVLDVELALPLPKMTYAEAMSKYGSDKPDTRFGYE
LTDISDVVCNCGFKVFADATQPGKSVRGINVKGKADDFTRKQISSLEEHAKTYRAKGLAW
MKVGQEGVTSPIAKFFNEEEMNAILTKMNAEVGDLLLFVADKNSIVFDALGQVRLEVANR
LNLLDKNVYNLLWVTEFPVFEEDEETGTFSAMHHPFTSPMDEDLDKLEEGDKSSLRAKAY
DIVLNGYEIGGGSVRISNSDIQSRMFKALGFTEERANEKFGYLLEAFKYGTPPHAGLAFG
LDRLVMLLAGTDNIREVIAFPKNQNAVCPMTNAPTLAEDEQLEELSIKVDIKDNE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
ttggaaactttaaagggtttaaagagaactcactactgtggagagttgagagaaaaaaac
ataaatgaagaagtcgtacttatgggatgggtacagaaaaaaagaaatttaggtggtctt
gtatttgttgatttaagagatacaagtggattatgtcaaatagtttttgatacagatgta
gataaagaagcttttgaaaaagctgaaaaattaggggctgaatttgtaatagctgtaaaa
ggaaaagtatgcgaaagacaatctaaaaaccctaatatgccaactggtgatatagaaata
tttgcaactgaacttagacttttaaacaagtcagaaactccgcctatttatataaaagat
gatgatgatgtttctgaagcactaagattaaaatatagatacttagatttaagaaaacca
tctatgcaaagaaatttaaaattaagacataaagtaatgaatattacaagaaattactta
tcaaacaatagattttgcgaaatagaaacaccatttttaatagctccaacaccagaagga
gcaagagattatctagtaccaagtagagttaatccaggaaaattttacgcattaccacaa
tcaccacaattatataaacaattattgatggtaagtggtatggataggtatttccaaata
gttaaatgctttagagatgaagatttaagagcagatagacaaccagagtttacacaaata
gactgtgaaatgtcttttgtcgagcaagaagatgttatgagtatgattgaaggtttgctt
gaagcgatatttaaagaagttttagatgtagaattggcacttccacttcctaagatgact
tatgcagaagctatgtctaaatatggttcagataaaccagatactagatttggatatgag
ttaacagatatatctgatgttgtttgtaactgtggatttaaagtgtttgctgatgctaca
caaccaggaaaaagtgttagaggtataaacgtaaaaggcaaagctgacgactttactaga
aaacaaatatcatcactagaagaacatgctaagacatatagagcaaaaggtcttgcttgg
atgaaagtaggacaagaaggagtaacttctccaatagcaaaattctttaatgaagaagaa
atgaacgctatacttacaaaaatgaatgctgaagtaggagatttacttttatttgtagct
gataaaaactcaatagtatttgatgctttaggacaagttagacttgaagtagcaaatagg
cttaatctattggataaaaatgtatataacttactatgggtaactgagttcccagttttt
gaagaagatgaagaaacaggcacattttcagcaatgcatcacccatttacatcacctatg
gatgaagatttagacaagttagaagaaggtgataagtcatctttaagagcgaaagcttat
gatattgtattgaatggttatgaaataggtggaggaagtgttagaatatcaaattctgat
attcaatcaagaatgtttaaagcacttggtttcacagaggaaagagctaatgaaaagttt
ggttatttattagaagcatttaaatatggtactcctcctcatgctggtctagcttttggt
cttgatagacttgttatgttacttgcaggaactgataatataagagaagttattgcattc
cctaaaaatcaaaatgctgtttgccctatgacaaatgctcctacattggcggaagatgag
caattagaagaattaagtataaaagttgatataaaagataatgaataa
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