Cronobacter dublinensis: AFK67_04865
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Entry
AFK67_04865 CDS
T04061
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cdm
Cronobacter dublinensis
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdm03400
]
AFK67_04865
DNA repair and recombination proteins [BR:
cdm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AFK67_04865
Archaeal homologous recombinant proteins
AFK67_04865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
cobW
nSTAND3
AAA_15
T2SSE
ABC_ATPase
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ALB65838
LinkDB
All DBs
Position
complement(1056951..1060100)
Genome browser
AA seq
1049 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHRTPR
LNALSQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQSRARGQPDGNLQAPRVELARCD
DGKIIADKIKDKLDRIAALTGLDYDRFTRSMMLSQGQFAAFLNAEARARAELLEELTGTE
IYGQVSARIFEQHKEARSQLEKLESQAQGVTLLDEAQRESLTTGLQALTDDEKTQLAQQR
QLQQQHLWLTQRGALAAALEAARRGTAQAEQALQDAAPQLARLEAALPAEKLRPAWLRCQ
ELETSLAATRRQHEEVSVRLQESAQRRRAIRQAAAEQAQTRSDELDQVARWLTEHDRYRL
WSSELAGWRAVLAQQKRDSQQLQALNDSIAATRRKRDALAQTGLALSPEDAARALATLNE
QRPLRQQLATLQAAFAPLTRRKARQQETSAALQTQIQQLEQQLAQKRQDYKTKQDEVTRA
KAVCELEQQIANLVDARARLQPGSPCPLCGATEHPAVEAYQALKPDASRLRLTQLEQEKE
QLGAEGAALRGQLDALVKQRQQQESEATSLLEEEQALTSQWQTLCAAAALNAAPGDDINP
WLDEQTQREQQLHLLRERQTLDDALHSAQRQRAALEDAYQAQQAALRAQLAAFSLTAPDD
NDPAPWFAAREEEAQRWQQQHEHQQRLREQLAACENLLALLPQEGDAPAAALPVDDLPRA
GQQAHTLCLSLEAQWQTLGAQLEQERTRHQAALRAFDEALAASQFADKAAFLAALLDDAT
LRQLEALQQRLTREREAQQTLLAQAQQALESHLNARPATLDDAVDARQSEAALALIAEQL
RDNTTRQGELRQQLRQDEENRARLTSLLAHIDAARREADEWGQLNHLVGSQKGDKFRKFA
QGLTLDNLVWLANNQLTRLHGRYLLKRKLSEDLELEVVDTWQADAVRDTRTLSGGESFLV
SLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDALNASGKTIGVISHVEA
MKERIPVQIKVRKINGLGVSRLAREYQVD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttaaccctgcggctgaaaaacctgaactcgctgaaaggcgaatggaaaatc
gactttaccgccgagccgttcgccagcaacgggctgttcgccatcaccggcccgacgggc
gcgggcaaaaccacgctgcttgacgccatctgcctcgcgctctatcaccgcacgccgcgc
ctgaacgcgctgtcgcaaagccagaacgacttaatgacccgcgacaccgccgaatgcctg
gcggaggtagaatttgaagtcaaaggcgtcgcctggcgcgccttctggagccagagccgc
gcccgcggccagccggacggcaatctgcaagccccgcgcgtggagcttgcgcgctgcgac
gacggcaaaatcatcgccgataaaatcaaagacaaactcgatcgcatcgccgcgctcacc
gggctcgattacgaccgctttacccgctcgatgatgctctcgcaggggcagttcgccgcg
tttctcaacgccgaggccagagcgcgtgccgaactgttagaagaactgaccggcactgaa
atttacggccaggtctcggcgcgcatcttcgagcagcataaagaggcccgcagccagctt
gagaagctggaatctcaggcgcagggcgtcacgctactggacgaggcacaacgcgaaagc
ctgacgacaggtttgcaggcgctcactgacgatgaaaaaacgcagctggcgcagcagcgt
cagttacagcagcagcacctgtggctgacccagcgcggcgcgctcgccgccgcgcttgag
gcggcccgccggggtacggcacaggcggaacaggcgttacaggacgccgccccgcagctc
gcccggctggaggcggcgctgccagcggaaaaactgcgtccggcctggctgcgctgtcag
gagctggagacctcgcttgccgccacccgacgtcagcacgaagaagtgagcgttcgctta
caggaaagcgcgcagcgccgccgggcgatccgccaggcggcggcggagcaggcgcagacc
cgcagcgatgagctcgaccaggtggcccgctggctgacagagcacgaccgctatcgcctc
tggagcagcgaactggcgggatggcgcgcggtgctggcgcagcaaaaacgcgacagccag
cagttacaggcgctcaacgacagcatcgcggccacccggcgcaagcgcgacgcgctggcg
cagaccgggcttgcgctctcgccagaagacgccgcccgcgcgctcgcaacgctcaatgaa
cagcgcccgctgcgccagcagctggcgacgcttcaggccgcctttgcgccactcacccgc
cgtaaagcgcgccagcaggaaaccagcgccgcgctgcaaacgcaaatccagcagctggag
cagcagcttgcgcaaaaacgccaggattacaaaaccaaacaggatgaagtgacccgcgcg
aaagcggtgtgcgagctggagcagcagatagcaaacctggtcgacgcgcgcgcgcgcctg
caacctggcagcccctgcccgctctgcggcgcgaccgaacatccggcggtggaggcgtat
caggcgctgaagcccgacgccagccgcctgcgtctcacgcagctggagcaggaaaaagag
cagctcggcgccgagggcgcagcgctgcgcggtcagctcgacgcgctggtaaaacagcgc
cagcagcaggaaagcgaagcgacaagcctgctggaagaagagcaagcgctcacctctcag
tggcagacgctctgcgccgccgccgcactcaacgcggcgccgggcgacgatatcaacccg
tggcttgatgaacagacacagcgcgagcagcagctgcatctgctgcgcgaacgccagacg
ctggatgacgccctccacagcgcgcagcgtcagcgcgccgcgcttgaggacgcgtatcag
gcccagcaggcggcgcttcgcgcccagctggcggcgttctcgctcaccgcgccggacgat
aacgacccggcgccatggttcgccgcgcgtgaagaagaagcgcagcgctggcagcagcag
cacgagcaccagcagcgcctgcgcgagcagctcgcggcctgcgaaaatctcctcgccctg
ctgccgcaggagggcgacgcgcccgccgccgccctgccggtggatgacctgccgcgcgcg
ggccagcaggcccacacgctctgtctgtcgctggaagcccagtggcagacgctcggcgcg
cagcttgaacaggaacgcacgcgccatcaggccgccctgcgcgccttcgatgaggcgctg
gccgcgagccagtttgccgataaagcggcgtttctcgccgccctgctggacgacgcgacg
ctgcgtcagctggaggcgttacagcagcggctgacgcgcgagcgcgaggcgcagcagacg
ctgctggcgcaggcgcaacaggcgctggagagccatctcaacgcccgcccggcaacactt
gatgacgccgtcgacgcgcgccagagcgaagcggcgctggcgcttatcgcggagcaattg
cgcgataacaccacgcggcagggcgagctgcgccagcagctgcgtcaggatgaagagaac
cgcgcgcgcctgacatcgctgctggctcatatcgacgcggcacgccgcgaggccgacgag
tggggccagctcaaccacctggtcggttcccagaaaggcgacaagttccgtaaattcgcc
caggggcttacgctcgataatctggtgtggctcgccaacaatcagctgacgcgcctgcat
ggccgttatctgcttaagcgcaagctgagcgaagacctggagcttgaagtggtcgatacc
tggcaggcggacgcggtgcgcgacacccgcacactctccggcggcgagagtttcctggtg
agcctggccctggcgctggcgctctcggatctggtgagccataaaacccgcatcgattcg
ctgttccttgatgagggcttcggcacgctggacgcgcagacgctcgacaccgcgctggac
gccctcgacgcgctgaacgccagcggcaaaaccatcggcgtcatcagtcatgtcgaggcg
atgaaagagcgcatcccggtgcagattaaggttcgtaagattaacgggcttggcgtgagc
cggctggcgcgggagtatcaggtcgactga
DBGET
integrated database retrieval system
