Candida dubliniensis: CD36_25050
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Entry
CD36_25050 CDS
T01140
Name
(RefSeq) polyprotein of L1-like non-LTR retrotransposon Zorro 1, putative
Organism
cdu
Candida dubliniensis
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
Exo_endo_phos
MPN_2A_DUB_like
PTSIIB_sorb
Motif
Other DBs
NCBI-GeneID:
8050024
NCBI-ProteinID:
XP_002421610
UniProt:
B9WKJ9
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Position
R:6979..9033
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AA seq
684 aa
AA seq
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MMKMMSIISMKPWMKFSNKIQKMITWKQKTTKMELLMLMYQKKQSTNLFRLKMRVSTEYV
NVGSFNCEKTQNVLAPQELIEKYDILFLQELNESNIKVIKQLNLPTTLIFSEKTGIIIHH
KINGLIKVHKQHVIDIGIQLAPDLSDALVTINNKKYHLINTYYPIADKSKQQKALTTCLS
ENLTKDKPIIWGGDFNHILSETLDRSYEGADKPGEAGSRKLSLELYHQLQLKDVFRSLFP
TQKNHTNNNPHNNRRIDRFHISETIEVGEFHQEKLTTIKSTHDLIAITIKISNKPIIDMG
RPRFIIRDNLMENPLFINDIIKNKPKNWKQLKQTISKLTRTKRYKKMEKELDSDIFDDLR
VRFNGKTKPKNKAILKMEDLDGTIAETTDEILIIAKLFMETLYKKSPNIPNNITHYLKEF
TTKVTNDERAKLDAPITLNELTDELTGKSASSTPGEDGFNFRFIKICWEVIGPILVNVSE
EIQNSGKLPQELQNIIINLIPKKGKSNNINNTRPISIIDCAIRLISSVYNSRFQKILTNY
ISPDQHGFLSGRTISDASQKIQLVIDEMNKHKRKISGPGAILVDMAKAFDSLDHSYLKQV
LKKFNLGPRTISFCMAITSGHKGQVSVNNKTSEEFKLDRGVRQGNPLSPLLFILALEPLF
FQLNRRIQGIHMGKKLRVTRRHIL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaatgatgctgattatactgatgaaaccatggatgaagtttctgaacaagatt
cagaagatgataacatggaaacagaagactaccaagatggaattactaatgttgatgtac
cagaagaaacaatcaaccaatttattcagattaaaaatgagagtcagtactgagtacgtc
aacgtcgggtcattcaactgtgaaaagacccaaaatgtattagctccacaagaactaatt
gaaaaatatgacattctattcctccaagaattgaatgagtcaaacataaaagtaatcaaa
caacttaacttaccaacaaccttgatattttctgaaaaaaccggaattatcatacaccat
aaaatcaacggacttatcaaagtccacaaacaacatgtgattgatataggcattcaacta
gctcctgatctcagtgatgcattggttacgatcaataacaagaaatatcacttgatcaat
acctactacccaatcgcagacaaatcaaaacaacaaaaggcacttacaacatgcctatcc
gaaaatttaacaaaagataaacccattatatggggtggggattttaaccacattctctcg
gaaactctagataggagttacgagggtgcagacaaaccgggagaggctggttcgaggaaa
ctatcattagaactctaccatcaactccaactcaaggatgtcttcaggtcactattccca
acacaaaaaaaccacacaaataataaccctcataacaacagaagaattgacaggtttcac
atcagtgaaacaattgaagttggggaattccaccaagaaaaattaacaacaatcaaatcc
acacatgatcttattgcaatcacaattaaaataagcaataaaccaattattgacatggga
agacctaggtttatcatcagagacaacctcatggaaaatccattgttcattaatgacatt
atcaaaaataaaccaaagaattggaaacaacttaaacaaacaatttcaaaactaaccaga
accaaacgatacaagaaaatggagaaagaattagactcagacatctttgatgacttaaga
gtcagattcaacggcaaaaccaaaccaaaaaataaggcaatacttaaaatggaagacttg
gatggcactatagccgaaaccacggatgaaattctaataattgccaaacttttcatggaa
acattgtataaaaaatcaccaaacatacccaacaacatcacccattatttaaaagaattt
acaaccaaagtaaccaacgacgaaagagccaagttagatgctcccatcacattgaatgaa
ttaacagatgaactaacaggaaaatccgcctcttctaccccaggggaggatggattcaat
ttccggtttatcaagatatgctgggaagtaattggacccatcttggtcaacgtaagtgaa
gaaattcaaaatagtggaaaactcccccaggagttacaaaacatcatcatcaacctcatt
cccaaaaaagggaaatcaaataacatcaacaataccagacccataagtataatagattgt
gccatcagattaattagcctggtctataatagtaggtttcagaaaattctcaccaactat
atcagtccagaccaacacggatttttatccggcaggacaatcagcgatgcttctcagaaa
atccaattggtaatagatgaaatgaacaaacacaaaagaaaaattagtgggccgggggca
atcctcgtggatatggcaaaagcctttgattcattggaccacctgtatctcaagcaggta
ctcaaaaagttcaatttgggaccgaggacaatactgttttgcatggccataacaagtgga
cataagggacaagtcctggtgaataacaagacttctgaagaattcaagttggacagaggg
gtacgacagggaaatccattgtctcctcttttgtttatacttgctttagaacctttgttt
tttcagttgaaccggagaatccaagggatccacatggggaaaaagttgcgggtcactcgg
agacacattctctaa
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