Dickeya fangzhongdai ND14b: LH89_08885
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Entry
LH89_08885 CDS
T03347
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LH89_08885 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ced01007
]
LH89_08885 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ced03016
]
LH89_08885 (lysS)
Enzymes [BR:
ced01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LH89_08885 (lysS)
Amino acid related enzymes [BR:
ced01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LH89_08885 (lysS)
Transfer RNA biogenesis [BR:
ced03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LH89_08885 (lysS)
Prokaryotic type
Other AARSs
LH89_08885 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AIR69310
LinkDB
All DBs
Position
complement(2052053..2053570)
Genome browser
AA seq
505 aa
AA seq
DB search
MSEPQNQGAEQALDLNNELRTRREKLASLRETGVAFPNDFRRDSTADRLHASYDEKDNEE
LEALGLEVNVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
IVGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDES
RHTFRVRSQILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGTTEVPYGDQVFDFGKPFEKLTMREAIKKYRPETNMADLDGFDAAKAIAESIGI
KVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacaaaaccagggtgccgagcaggcgctggatctcaataacgaactcaga
acgcgccgcgagaagctggcgtcgttgcgtgaaaccggcgtggctttcccgaatgacttc
cgccgtgacagcactgccgatcggctgcacgccagctacgacgaaaaagacaacgaagag
ctggaagcgctgggtctggaagtgaacgtggccggccgcatgatgacccgccgtatcatg
ggtaaagcgtcgttcgttacgctgcaggacgtgggcggccgtattcagctgtatgtagcg
cgcgacgatctgccggaaggcgtttacaacgaacagttcaagaagtgggacctcggcgat
atcgtcggcgcgcgcggtaagctgttcaaaaccaagaccggcgagttgtcgatccactgt
accgaactgcgtctgctgaccaaagcgctgcgcccgttgccggacaagttccacggcctg
gcggatcaggaaacccgttaccgtcagcgctatctggacctgatcgctaacgacgagtcc
cgccacaccttccgcgtgcgctcgcagattctggccggtatccgccagttcatggtcggc
cgcgacttcatggaagtggaaaccccgatgatgcaggtgatccccggcggcgcatctgcg
cgtccgttcatcacccatcacaacgcgctggatatcgatatgtacctgcgtattgcgccg
gaactgtatctgaagcgtctggtggtgggcggttttgaacgtgtgttcgagatcaaccgt
aacttccgtaatgaaggcgtgtcgccgcgtcacaaccctgagttcaccatgatggaactc
tacatggcgtacgcggactataaagacctgatcgaactgaccgagtcgctgttccgcacg
ctggcgcaggacgtgctgggcaccactgaagtgccgtacggcgaccaggtgttcgacttc
ggcaagccgttcgagaagctgaccatgcgtgaggcgatcaagaaataccgcccggaaacc
aacatggcggatctggacggcttcgacgcggcgaaagccatcgcggagtccatcggcatc
aaggttgagaagagctggggtctgggccgtatcgtaaccgagatcttcgaagaagtggcg
gaagcgcatctgattcagccgaccttcatcaccgaatacccggcggaagtctctccgctg
gcgcgccgtaacgatcagaacccggaaatcaccgaccgctttgaattcttcatcggcgga
cgtgaaatcggcaacggtttctccgagctgaacgacgctgaagatcaggcgcaacgcttc
caggatcaggttgctgcgaaagacgccggcgatgacgaagccatgttctacgacgaagac
tacgtcactgcgctggagcacggcctgccgccgaccgccggtctgggcatcggtatcgac
cgtatggtcatgctgttcaccaacagccacaccattcgcgatgtgatcctgttcccggcg
atgcgtccgcagaaataa
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