Dickeya fangzhongdai ND14b: LH89_10995
Help
Entry
LH89_10995 CDS
T03347
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00730
Thiamine metabolism
ced01100
Metabolic pathways
ced01240
Biosynthesis of cofactors
Module
ced_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LH89_10995
Enzymes [BR:
ced01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LH89_10995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIR69707
LinkDB
All DBs
Position
2500433..2502400
Genome browser
AA seq
655 aa
AA seq
DB search
MSTESTQSTEQNVSGEKKSSGRREQRAAAQQFIDTLRGSTFPNSQRIYLTGSQPDIRVPM
REIQLSPTLVGGSRDNPRYEANEAVPVYDTAGPYGDPATTPDVHRGLGKLRADWIAGRDD
TEALPKASSGFTQQRLADIGLDHLRFEHLPQPKRAKAGRRVTQLHYARQGIITPEMEFIA
IRENMGRERVRGEVLRQQHPGHSFGALLPDNITPEFVRQEVAAGRAIIPANINHPESEPM
IIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRN
SPVPIGTVPIYQALEKVNGIAENLTWELFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAK
RLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVALSLGDGLRPGSIQDAND
EAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLT
TDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKNDVKQGLIAYKIAAHAADL
AKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPETARAYHDETLPQESGKVAHFCSMCGP
KFCSMKITQEVRDYAARQEAQAQPVDVGMAQMSAEFRARGSELYHTATSLPQEER
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaatcaacccagtctacagaacagaatgtttccggagaaaagaaatcctcc
ggtcgtcgcgaacaacgcgccgccgcccagcagtttatcgacacgctgcgcgggtcgacc
tttcccaactcgcagcgcatttatctgaccggctcacagccggacatccgcgtgccgatg
cgggaaatccagcttagcccgacgctggtgggcggcagccgcgacaatccgcgctatgaa
gccaacgaagcggtgccggtgtatgacaccgcaggcccgtatggcgacccggccactacc
ccggacgtacaccgcgggcttggcaaattgcgcgccgactggattgccgggcgcgacgac
accgaagccttaccgaaagccagctccggctttacccaacaacggctggcggatatcggc
ctcgaccatctgcgttttgaacatctgccgcagcctaagcgcgccaaagccggtcgccgc
gttacccagttgcactacgcccgtcagggcatcatcacgccggagatggaattcatcgcc
atccgcgaaaacatggggcgcgaacgcgtgcgcggcgaggtgctgcgccagcagcatccg
ggccacagtttcggcgcgctgctaccggacaacatcacgccggaattcgtgcgtcaggaa
gtagccgccgggcgcgccatcatccccgccaacatcaaccaccccgaatcggaaccgatg
atcatcggccgcaattttctggtgaaggtgaatgccaatatcggcaactccgccgtgacc
tcgtctatcgaagaagaagtggaaaaactggtgtgggccacccgctggggcgcggacacg
gtgatggacttgtccaccgggcgctacatccatgaaacccgcgagtggatcctgcgcaac
agcccggtgccgatcggcacggtgccgatctatcaggcgctggaaaaggtcaacggcatc
gcagaaaacctgacctgggaactgttccgcgacaccttgctggagcaggcggaacaaggg
gtggattatttcaccattcatgccggcgtgttgctgcgctacgtaccgatgaccgccaaa
cgtctgaccggcattgtgtcgcgcggcggctcgattatggccaagtggtgcctgtcgcac
catcaggaaaacttcctgtaccagcatttccgtgaaatctgcgaaatctgtgccgcctat
gacgtcgcgctgtcgctcggcgacggcctgcgcccgggttccattcaggatgccaacgac
gaagcgcagttcgccgaactgcacacgctgggcgaactgaccaaaatcgcctgggaatac
gacgtgcaggtgatgatcgaaggccccggccatgtgccgatgcagatgatccgccgcaac
atgaccgaagagctggaacactgccacgaggcgccgttctatacgttaggcccgctcacc
accgatatcgcgcccggttacgaccacttcacctccggcatcggcgcggcgatgatcggc
tggttcggctgcgccatgctgtgctacgtcaccccgaaagagcatctggggctaccgaac
aaaaacgacgtcaaacaagggttgatcgcctataaaattgccgcccacgccgccgacctg
gcgaaaggccaccctggcgcgcagatccgcgacaacgccatgtccaaagcgcgttttgaa
ttccgctgggaggaccagttcaatctggctttggacccggaaaccgcccgcgcctaccac
gacgaaaccctgccgcaggaatccggcaaggtggcgcatttctgctcgatgtgcggaccg
aaattctgttcgatgaagataacccaggaagtgcgtgactacgccgcccgtcaggaggcg
caggcgcaaccggtggatgtcggcatggcgcaaatgtccgccgaattccgcgcccgcggc
agtgagctgtaccataccgccaccagcctgccgcaggaagaacgctga
DBGET
integrated database retrieval system
