KEGG   Caenorhabditis elegans (nematode): CELE_F59A3.6
Entry
CELE_F59A3.6      CDS       T00019                                 
Symbol
rpa-4
Name
(RefSeq) Replication protein A C-terminal domain-containing protein
  KO
K10739  replication factor A2
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03030  DNA replication
cel03420  Nucleotide excision repair
cel03430  Mismatch repair
cel03440  Homologous recombination
cel03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CELE_F59A3.6 (rpa-4)
   03420 Nucleotide excision repair
    CELE_F59A3.6 (rpa-4)
   03430 Mismatch repair
    CELE_F59A3.6 (rpa-4)
   03440 Homologous recombination
    CELE_F59A3.6 (rpa-4)
   03460 Fanconi anemia pathway
    CELE_F59A3.6 (rpa-4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cel03032]
    CELE_F59A3.6 (rpa-4)
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_F59A3.6 (rpa-4)
DNA replication proteins [BR:cel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    CELE_F59A3.6 (rpa-4)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     CELE_F59A3.6 (rpa-4)
   MMR (mismatch excision repair)
     CELE_F59A3.6 (rpa-4)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     CELE_F59A3.6 (rpa-4)
SSDB
Motif
Pfam: RPA_C MCM_C Cas_TM1802
Other DBs
NCBI-GeneID: 186576
NCBI-ProteinID: NP_001368496
WormBase: WBGene00019079
Ensembl: WBGene00019079
LinkDB
Position
I:complement(<5509470..>5511689)
AA seq 170 aa
MGKLKNVAGNKMILIYYLQKLADNKEYEIFKLETQASYLFFKKNLIERMRTSKAYKWEGM
LAPPLSRQNHKIDAQAILSPVITRQVKPTTKTQSESISPKTSSALKAKVGAVIRSEAASK
GYGDEEGVPFERILARIKDIPESRLRDILTEMGDSGMIYSARDNEFMSLN
NT seq 513 nt   +upstreamnt  +downstreamnt
atgggaaaattgaagaatgtcgcaggaaataaaatgattcttatatactaccttcaaaag
ttggctgacaacaaggagtatgaaattttcaagttggagacacaagcttcttatttattc
ttcaaaaagaatttgatcgagcgaatgcgaacttctaaagcttataaatgggaaggaatg
ctggctccgccgttgtcacgacaaaatcataaaattgacgcacaggctattttgagccca
gttatcactagacaagtgaaaccgaccacgaaaacacagtccgaatcaatttcaccaaaa
acttcttcggcattgaaagcgaaggttggcgcagttatccgatcagaagccgccagtaag
ggatacggcgacgaagaaggcgtaccattcgaaagaatcttggctcgcataaaagatatt
ccagagtctcgtcttcgagacattctgacagaaatgggagacagtggaatgatttactcg
gccagagacaatgagttcatgtcgcttaattga

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