Caenorhabditis elegans (nematode): CELE_Y49F6B.1
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Entry
CELE_Y49F6B.1 CDS
T00019
Symbol
cyh-1
Name
(RefSeq) Cyclin-H
KO
K06634
cyclin H
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03022
Basal transcription factors
cel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CELE_Y49F6B.1 (cyh-1)
09124 Replication and repair
03420 Nucleotide excision repair
CELE_Y49F6B.1 (cyh-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_Y49F6B.1 (cyh-1)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_Y49F6B.1 (cyh-1)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CELE_Y49F6B.1 (cyh-1)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CELE_Y49F6B.1 (cyh-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
CARME
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
190078
NCBI-ProteinID:
NP_001379352
WormBase:
WBGene00021714
LinkDB
All DBs
Position
II:<3505017..>3510597
Genome browser
AA seq
337 aa
AA seq
DB search
MYATSTQKREWTYTPEKLAAMRLEINIKFRQKYESVMQPDELELFVTPEEELRMQRSIED
AALKFADKFRPHIWPSVKWTALAFFKRAFLVWVPSDTSIRMVMMACFYLAMKIDEFYITI
EDFVKNMKSYSVGEPRQNAERILKLEPELMKILDYNLTVHCPYRPYEGHLMDMKTRMLLL
NFDLESIRRDSMRFFQNALQTDVLLLYPPSQIALAAINFGLHAQVSGKSDEILREFLRKL
IGIEEDSWAHRDARPEDLEKLEKTVTRVNQIMREVDRNFVAVTEQERENHKSQLARIQAL
IPALDERRKEQWLAGGGVGLMPGELAEQPVDSDDEIN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgacgagcacacaaaaacgggaatggacgtatacaccggaaaagttggccgca
atgcgtttggagataaacataaaattccgtcaaaaatacgagtcagtaatgcagccggac
gagttggagctctttgtgacacctgaagaggagctcagaatgcaaagatcaattgaggat
gctgctttgaaattcgccgacaaattccgcccacacatatggccatcagtgaaatggaca
gccttggcgtttttcaagcgggcttttcttgtctgggtgccatcagacacgtcgattagg
atggtaatgatggcttgcttctacttggcaatgaaaatcgacgaattctacattacaatc
gaagatttcgtgaagaatatgaaaagttacagcgttggagaacctcgacaaaatgccgaa
cggattttgaagctggagccggagcttatgaagattctcgactataatttgactgtacat
tgcccgtataggccatacgaaggccatctaatggatatgaagacccgaatgcttcttcta
aatttcgatctcgaatcaatccgccgcgattctatgagattcttccagaatgcactacaa
accgacgtgcttctcctctatccaccgtcacagattgcactggccgccattaatttcggg
ctccatgctcaggtttcaggcaaatccgacgagattctacgcgagtttcttcggaaactt
atcggaatcgaagaggactcgtgggctcatcgtgatgctcgtccagaggatttggaaaag
ctcgaaaagacggttacgagagtcaatcaaataatgcgagaagtcgatcgaaatttcgta
gcagtgacagagcaagaacgggagaatcacaaaagccagctggcacggattcaagcattg
attccagcacttgatgaacgacgaaaagagcaatggttggctggtggaggtgttggattg
atgcctggagagctcgccgagcagccagttgattctgatgacgaaattaattga
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