Caenorhabditis elegans (nematode): CELE_Y54E10A.11
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Entry
CELE_Y54E10A.11 CDS
T00019
Symbol
Y54E10A.11
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_Y54E10A.11 (Y54E10A.11)
04121 Ubiquitin system [BR:
cel04121
]
CELE_Y54E10A.11 (Y54E10A.11)
Enzymes [BR:
cel01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CELE_Y54E10A.11 (Y54E10A.11)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CELE_Y54E10A.11 (Y54E10A.11)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CELE_Y54E10A.11 (Y54E10A.11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-ANAPC11
zf-rbx1
RINGv
FANCL_C
zf-C3HC4
RWD
zf-RING_16
CEP104-like_TOG
FKBP26_C
C1_1
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
171893
NCBI-ProteinID:
NP_491118
WormBase:
WBGene00021831
Ensembl:
WBGene00021831
UniProt:
Q65XX2
LinkDB
All DBs
Position
I:complement(3176418..3192857)
Genome browser
AA seq
1446 aa
AA seq
DB search
MSKQQRRKGNAKNASSAAAHEYLAQGGATFVGLTPEMNIFEVASSNRLHQVVEIDDETRI
VMKKLTKKDCQTREKGLKELMELINTENSSIESSYEHFCGLVAQLTTDGSPTVRMLTMKV
ISQFLTKLKKSASKGLKKIIPFVLFAKSDVTNGVAAAASAVIRDGFDADKKRQVVELFVP
NTFDLAAKIAEGKHELSLPAEYDASEDLETRKMRLETQSLNTFLSYIKEYGNESKLWEEP
ARKLFSNSEFIKKTFAGKKEALKVQLLNISYKFSDNIEVILSNPVISTYIQASLDAQTFS
TECATAWEGILILLPDERFHAKCSLQKGIYPRLLNLIRKKGNHWRVLKHYLLPAVSVLLQ
KLENPALITSIITSFTDNLPWQAEASMNAIHCWFCTFSDFVKWILGNDRINLEILKDLSP
LIVEMSNQSMHFNTAEATECISGLIHWIIEKKVLENPAEFFDLLKTSIYEVAPPEKSRLF
ADSLTLPAKHLELAHLHGNLLSNPDVDFHIIRNLARASNSEYFEETCRNINNFEFIENSD
RFDMLQAVEIVKLIEMKPSLSLQIKNNHVGRQLLLSENSEIWEKSLKNVPAGVFQEMVNF
WHEKRNGKAIAQAVNFLKKMGIQLDTNAAAENVDFLISLLQSLDSKEDPEERKNLVLKLL
SALFDAEDEPKLEHFESLKSHLNGDFEQFFEKLFANMEEEDAERVLEIAARFDKLVGFCD
ADSRGEIAGKMILGRREFDEMSEKLHFLELDVLTVSQHTTIITDALSRPIEHLEEKEATK
MVKELGRLALFSVASNYNSSIHQLFAWQMIRVISALGNRYCLKFLDEELQQLRIELEKRV
IKSEEIQKLINDGCCCAPNFITDTYGIPEKRQKFEEYSEDMDTKIETIYLKTDTPLEYVE
KVFEASQSENSFPLFQFDQSKKYEWLANLTFVKRFIQCGGEIFRAENLEFRDFTLCGIIT
VLDTSTDILIDSPHSFSENPLLEALTTLYLELFVVLTDATKRGAYSEQSVEEWNEFYTPT
IHTYCIRLFRTIRRDQQPTPFVRALLRALFVISEFPTSFSNDDDVANQEFIPELSVFKYP
AFQESCIAQAFSLFASNNEHIQLIAYSVARLLMPIMFKLENAAALKSNEDSELPVSTNRR
KLSLPVMISKSYPKDHHNPHVGPLLLDLTLLPLENTKDSGFSQEHRVAYCDVIDPFFKNA
LNALMLDQPFEFRQVPIGCRIPKSQERAYYLESDLSASPIFFDKFASRLLFKSMTLLPAA
IRLFYKGMPNCFMPMFQETVTKYASRLLIEQELGKVREAKFEGEMKVRTVPVTGEIIAEY
VVEETKMKLTIGLPPDYPLSVPSLTLDKAIVKTDRAKKWLLQLNAYLFHQNGAILEGIEM
WKRNVDKGVEGVEDCTICMMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPL
CRNNFT
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcagcaacggcgaaaaggaaatgcaaagaatgcgagcagtgcggcggctcac
gagtatttggctcaaggaggagccacgtttgtcgggttgacgcctgagatgaatattttc
gaggtggccagcagcaatcgactccatcaagtagtggaaatcgacgacgaaactcggatt
gtcatgaaaaaattgacgaaaaaagactgtcagacgagagaaaaggggctcaaagagctt
atggaactgataaacacggaaaatagttcgatcgagagctcctatgagcatttctgtgga
ctcgtcgcccagttgaccacagatggaagcccaactgtgagaatgctcacgatgaaagtg
atttctcagtttttgacaaagttaaagaaatctgcgagtaaaggattgaagaaaatcatt
cctttcgttctttttgcaaagtctgatgttacgaatggagtcgctgcggctgcttctgca
gttattcgagatggatttgatgcggataagaagcgacaagttgtggagctctttgtgccg
aatacctttgatttggcagcgaaaattgcggagggaaagcatgaactctcgctgccagcg
gaatatgatgcttcggaggatctggaaacgcggaaaatgagactggagacgcaatctttg
aatacattcctatcttatattaaagagtacggaaatgagtccaagctctgggaagagcca
gcgagaaagctgttttccaattcggaatttatcaaaaaaacgtttgccgggaagaaagaa
gcgttgaaagttcaacttttgaatatttcctacaaattttcggataatattgaagtaatc
ctgagtaatccggtcatatctacatatattcaagcttcactagatgctcaaactttcagt
acagaatgtgcaactgcttgggaaggaattctaattttacttcctgatgagagatttcat
gcgaagtgttctctacaaaaaggaatatatccaagacttctgaatttgattcgaaagaaa
ggaaatcactggagagttctcaaacattatctcctgccagcagtttcggtgcttcttcaa
aagttggaaaatcctgccctgattacttcgattattacaagtttcacggataatttgcca
tggcaggccgaggcatcgatgaatgcgattcattgctggttttgcacgttttcggatttt
gtgaaatggattcttggaaatgatcggattaatttggaaattttgaaggatttgagtcct
ttgattgtggaaatgtcgaaccaatcgatgcactttaacaccgcagaggcaaccgaatgc
atttccggattaattcattggattatcgagaaaaaagttttggaaaatcccgccgaattt
tttgatctcctaaaaacctccatttacgaagttgctccacccgagaaaagtcgacttttt
gcggattctttaacacttcctgcaaagcacctggaacttgctcatttacacggaaatttg
ctctcaaatcctgatgtcgattttcatattatcaggaatttggcgcgtgcttcgaattct
gagtattttgaggaaacttgccgaaatatcaataatttcgagtttatcgaaaattccgat
cgatttgatatgcttcaagctgtggaaattgtgaaattgattgagatgaagccttctctg
agccttcaaatcaaaaataatcacgttggacgtcaacttttactctctgaaaattcagaa
atttgggaaaaatcgctgaaaaacgtcccagctggagttttccaggaaatggtgaatttc
tggcacgagaaaagaaatggaaaggctattgcacaggctgtgaattttctgaaaaaaatg
ggaattcagttggacactaatgccgctgctgagaacgttgattttctcatttccctgtta
caaagtttggattccaaggaggaccctgaagaacgaaaaaatctagttttgaagctgctt
tcagcacttttcgatgcggaagatgagccgaaattggagcattttgagagcttgaagagc
catttaaatggagatttcgagcagttcttcgagaaattatttgcgaatatggaggaagag
gatgctgaaagagttttggaaattgcagctagatttgataagcttgttggattttgtgat
gcagattcgagaggggaaatcgctgggaaaatgatattgggaagaagagaatttgatgaa
atgtctgaaaaacttcattttctagaactagatgttctcactgtctcccagcacaccacc
atcatcactgatgctctaagccggccaattgagcatctggaagagaaagaggcgacgaag
atggtcaaagagctcggaagattggctctgttcagtgtggcttcgaattataactcttca
attcatcagttattcgcgtggcaaatgattcgtgtaatctctgcacttggtaatcgatat
tgtttgaaatttttggatgaagaacttcaacaattgagaatagaactcgagaagagagta
attaaatcagaagaaattcagaaattgataaatgatggctgttgttgtgcaccaaacttt
atcacagatacctatggaattcctgaaaaacgccaaaaattcgaagaatattcagaagat
atggatacgaaaattgagacaatttacctaaaaaccgacacacctctggaatatgttgaa
aaagtcttcgaagcatcacaatctgaaaattcatttccactatttcaatttgatcaatca
aaaaagtacgaatggctggcgaatttgacgtttgtgaagcgatttatccagtgtggcggg
gaaattttccgcgctgagaatttggaatttcgagattttacactttgtgggattattacg
gttttagatacctccacagacatcctaatcgattctccgcactctttctctgaaaatcct
ctacttgaagccctcaccaccctctacctcgagcttttcgtggtgctcaccgatgcgaca
aagcgtggagcatattcggagcaaagtgttgaagaatggaatgaattctacacaccaaca
attcatacctattgtattcgactattccgtacaattcgacgagatcaacagccgactccg
ttcgttcgggctcttctcagagcactttttgtgatttctgagtttccgacgagcttctca
aatgatgatgacgtggcgaatcaagagtttattccggaattgtcggttttcaagtatccc
gcattccaagaatcatgtattgcacaggcttttagtctatttgcatccaacaatgagcat
attcaattgatagcttattcagttgctagattactaatgccaataatgttcaaattggaa
aacgcagcagctctaaaatcaaacgaagattcagaattgccggtctctacgaatcgccgg
aagctttcactaccagtaatgatatcaaaatcatatccaaaagatcatcataatccacac
gttggcccattgcttctcgatttgacacttttaccactggaaaatacaaaagattcaggc
tttagccaagagcatcgggtcgcctattgtgacgtcattgatccatttttcaagaatgct
ttgaatgcattgatgttggatcagccatttgagttccgtcaggttcccattggttgtcga
attccgaaatcgcaagaacgagcgtactacttggaatcggatctatcagcttctccaata
tttttcgataaattcgcttcccgtcttctcttcaaatcgatgacattgctgccagcagca
attcgattattctataaaggaatgccaaattgttttatgccaatgttccaggaaactgta
acaaagtacgcgagccggttgctcattgaacaggaactcggaaaagttcgtgaagcgaaa
ttcgaaggagaaatgaaagttcgaacagttccagtaactggagagataattgccgaatat
gtggtcgaggagacgaagatgaagcttacaattggccttccaccggattatccactttct
gttccttcactgactcttgataaggcaattgttaagacggatcgagcgaagaaatggctt
ttacagttgaatgcctacctttttcatcaaaatggagcaattttagagggaattgagatg
tggaagcggaatgttgataagggtgtggagggtgttgaggattgtacgatttgtatgatg
actgtacatcagcagacacatcagttgccgaaaattaagtgcaaacagtgcaagaataaa
ttccattcgaattgtttgtacaaatggttcgaatcaagcaatcaatcgacttgcccactt
tgccggaataatttcacttaa
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integrated database retrieval system
