KEGG   Cellvibrio sp. PSBB006: CBR65_06860
Entry
CBR65_06860       CDS       T04891                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cell  Cellvibrio sp. PSBB006
Pathway
cell02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cell00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CBR65_06860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cell03021]
    CBR65_06860
Transcription machinery [BR:cell03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CBR65_06860
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 HTH_11 HTH_24 HTH_29 Sigma70_ECF KORA Rv2175c_wHTH GerE HTH_3 HTH_28 HTH_IclR HTH_31 HTH_17 HTH_10 HTH_36 MerR HTH_40 Fe_dep_repress Terminase_5 Sigma70_r3 FaeA Phage_terminase HTH_7
Other DBs
NCBI-ProteinID: ARU29976
UniProt: A0A1Y0G370
LinkDB
Position
1652320..1652823
AA seq 167 aa
MANLVQSHAIHTLYNDHQGWLHGWLRSKLGNTWDAADLVHDTFVKVLLKDEWSFIREPRA
YLTTIAHGLMVNSLRRKDLERAYLDAIAHLPEDEYPSPETRALVLETLIEIDVMLDGLAP
NVRHAFLLLQLEGLRHAEIAERLGVSVSSVRQYIAKAIQHCVLRHHE
NT seq 504 nt   +upstreamnt  +downstreamnt
atggcgaatctggttcagagtcatgccattcacacgctctataacgatcatcaaggctgg
ttacatggctggttgcgcagcaaactcggtaatacctgggatgctgcggacctcgttcat
gacaccttcgtgaaggtgctattaaaagatgaatggagctttattcgtgaaccccgtgct
tacctgaccaccattgcccatggattgatggtaaacagcctgcgccgcaaggatcttgag
cgagcttacctggatgccatcgcgcatctgccagaagatgaatacccttcccccgaaacc
cgcgcgctggtgctggaaaccctgatagaaatcgacgttatgctggatggcctggctccc
aacgtacgccacgccttcttgttgttacagctggaaggactgcgccatgccgagattgcc
gaacgactcggcgtgtccgtgagttccgtgcggcaatatatcgccaaagccattcagcat
tgcgtcctccgccaccatgaataa

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