Clostridium estertheticum: A7L45_19960
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Entry
A7L45_19960 CDS
T04811
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ceu
Clostridium estertheticum
Pathway
ceu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ceu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7L45_19960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceu03400
]
A7L45_19960
DNA repair and recombination proteins [BR:
ceu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7L45_19960
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A7L45_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
BrxC_BrxD
Motif
Other DBs
NCBI-ProteinID:
APC42170
UniProt:
A0A1J0GL97
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All DBs
Position
complement(4363046..4365031)
Genome browser
AA seq
661 aa
AA seq
DB search
MYEFKLHSKFKPTGDQPQAIDSLVKGIEKGEKFQTLKGVTGSGKTFTMANIIEKVQKPTL
VLAHNKILAAQLCSEFREFFPDNCVEYFVSYYDYYQPEAYIAQTDTFIEKDSSVNDDIDK
LRHSATSALLERNDVIVVASVSCIYGLGNPEEYKKLTVSLREGMEKDRNEVIRNLVDIQY
ERNDMNFIRGTFRVRGDTIDIFPASSSSEGIRVEFFGDEIEKIRSFDALTGETIGIRKHV
SIFPASHFATSKDKLEIGIAQIEQELEERLKELISEDKALEAQRLKQRTNYDIEMMREVG
YCTGIENYSRILDGRPAGTAPQTLMQYFPNDFLMFIDESHVTLPQVKAMFGGDKSRKTNL
IDYGFRLKSAYDNRPLTFPEFEKSMNQTVFVSATPSAYEEEHSENIAEQVIRPTGLLDPE
IVIRPVKGQIDDLYAIIQDTIKKGFRVLVTTLTKKMSEDLTKYFREMDMKITYLHSDIDT
IERMKIIQDLRLGTFDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNSESKVIMYADRITKSMKKAMDETTRRRKLQMEYNENHDIVPTTIVKDIRDVIGSITV
AEDEEVYETLEAAKEANYDETKKLMDKYENEMKQAAKDLHFEKAAQLRDIIYKLKKQIKD
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagtttaagttacattcaaagtttaagccaacaggtgatcaaccacaggctatt
gatagccttgttaaaggaattgaaaaaggtgaaaagttccagacacttaaaggggtaact
ggttcaggtaaaacttttactatggctaatattattgagaaagttcaaaaacctaccttg
gtgctagctcataataaaatcctagcagcacaactttgctcagagtttagggagtttttt
cctgacaattgcgttgagtattttgtgtcatattatgattattatcagcccgaagcttat
attgcacagacagatacatttatagaaaaagattcatcagttaatgatgatattgataaa
ttaagacattcagctacatctgcattacttgagcgtaacgatgttattgtggttgcttca
gtttcgtgtatatatggacttggtaatccagaagagtataaaaaacttacagtgtcactt
agggaaggcatggaaaaggatagaaatgaagtaataagaaatctagtagacatacagtat
gaaagaaatgatatgaattttattcgtggaacttttagagtacgtggcgacactattgat
atattccctgcatcgtcgtctagtgaggggattagggtagaattttttggagatgaaata
gagaaaattagatcatttgatgcgcttacaggagaaactataggtattcgtaaacatgta
tcaattttcccggcttctcatttcgcgacatcaaaggataaattagagattggtatagct
caaatagaacaggaacttgaagagagattaaaggaacttatttcggaagataaagcactg
gaggcgcaaagacttaaacaaagaactaattatgatattgaaatgatgagagaagttggt
tactgcactggtatagagaattattctagaattttagatggtaggcctgcaggaacagcg
ccacaaacattgatgcaatattttccaaatgatttcttgatgtttatagatgagagccat
gtaactcttccacaggttaaggctatgtttggaggagataaatcaagaaaaactaattta
attgattatgggtttaggcttaaatcagcttatgataatagacccttaacctttccagag
tttgagaagagcatgaaccaaacagtatttgtaagcgcaacgccaagtgcttatgaggaa
gagcatagtgaaaacatcgcagaacaagtaattagacctacgggattattagaccctgag
attgttataagaccggttaaaggacaaatagatgatttatatgctatcattcaggacaca
ataaaaaaaggttttagagttttagtaacaacactaactaaaaaaatgtcggaggattta
actaaatactttagagaaatggacatgaagataacttatttgcattcggatattgataca
atagaaagaatgaaaattattcaggaccttaggctgggaacgtttgatgtgttagtaggt
ataaatcttttaagagaaggattagatattccagaggtagctcttgttgcgatacttgat
gcagataaggaaggttttttgcgttctgaaacttcattaattcaaacaataggaagagct
gcaagaaattcagagagtaaagtaataatgtatgcagacagaataacaaagtctatgaaa
aaggctatggatgaaaccacaagaaggcgcaaacttcagatggagtataatgaaaatcat
gatatagtgccaactactattgtcaaagatattagagatgtaataggatctataacagtc
gctgaggatgaagaggtatatgagactctcgaagcggctaaagaagcaaattatgatgaa
actaaaaaattaatggataagtatgaaaatgagatgaaacaagcagctaaggatttacac
tttgaaaaggcagcacagcttagagatataatttataaacttaaaaagcagattaaagat
atttaa
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