Canis lupus familiaris (dog): 488907
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Entry
488907 CDS
T01007
Symbol
SLF1
Name
(RefSeq) SMC5-SMC6 complex localization factor protein 1 isoform X2
KO
K26126
SMC5-SMC6 complex localization factor protein 1
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfa03400
]
488907 (SLF1)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
488907 (SLF1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ank_4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
488907
NCBI-ProteinID:
XP_005618170
Ensembl:
ENSCAFG00000008034
VGNC:
46502
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All DBs
Position
3:complement(16131131..16215470)
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AA seq
1059 aa
AA seq
DB search
MEDGAPKHIIQMTGFKMEEKEALGKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAA
CAAGKWVLTKDYIIHSAKSGRWLDETTYEWGYKIEKDSHYSPQMQSAPKRWREELKRTGA
PGAFHRWKVVLLVRADKRSDSLVRVLEAGKANVILPKSSQSGITHVIASNARIKAEQEKD
HFKAPFYPIQYLGDFLLEKEIQNDEDSQSNSVWHKHGNQEKNKDFWKDMGFLEMKGALKE
TMCRTQKEIQNHNEDVNVSSLLTEHHKKEKLRDSRKGLKFVKMRGALRRHTCGTQKEIKK
KDEDIQRSYTLRKKRKKENERDSRKDIEHNKIRSTSRKHVYRDQKEMKNSVFADRAKESK
TKDVETDVDIAEIKNDLRKHIYRAQAIRYSCIRIDKQPVYNIEVKNAEFPRGVLNLIESL
IEGQFFKEAIEELSSLQAHYIPPVCLLHALLENILQDNIDTFSGRYFHILSALLHLHPPW
KSPAMSRYYLELFQCPTCMKGAWSLIEVLIRSCLYNESFCHQISKNIIGTKVLYLTLLKF
FFNLVESEVRHLSQKLYDWSDSQSLKITGKAILLEIFWSGNEASGLLTKPVNMLLEWTIY
SHKEKCKSNDVFKHELAYLLTGILGAAIDYWIFLGLKKGKNVMRHMSDDLGSYVSLSCDD
FTSQELEIFICSFSSSWLQMFVAEAVFKKLCLQSSISISSEPLSLQKMVYSYLPALGKTG
VHGTGKMQIPKKTGQRPCLESQRALLMLNGTKQKQVEGLPELPELNLAKCSSSLKRLKKK
SEGELSCSKENCPSLVTKMNFHKTNLKGETALHRACINNQVEKLILLLSLPGIDINVKDN
AGWTPLHEACNYGNTVCVQEILQRCPEVDLLTQVDGVTPLHDALSNGHVEIGKLLLQHGG
PVLLQQRNSKGELPLDYVVSSQIKEELFAITKIEDTVENFHAQAEKHFYHQQLEFGSFLL
SRMLLNFCSIFDLSSEFLLAFKGLTHLNELLVACKNYKETTSAHADWLLDLYARNIKTLQ
TLPNILKELPENLKVCPGVHTEALLVTLEMMCRSVTEFS
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggaagatggtgccccaaagcatatcatccaaatgacaggatttaagatggaagaaaag
gaagctctaggcaaattgcttttaaaactagattgcacttttattaagagtgagaaatac
aaaaattgtacacatcttatagctgaacgcctgtgtaaaagtgaaaagtttttagcagct
tgtgcagcagggaagtgggtactaactaaggactacataattcatagtgccaaaagtggc
agatggcttgatgaaacaacttatgaatggggctataaaatcgaaaaagactcccattat
tcacctcaaatgcaatctgcacctaaaagatggcgtgaagaactgaaacgcactggtgct
ccaggagccttccacagatggaaagttgtcctccttgttagagctgataaacgaagtgat
tctcttgtaagagttctggaggctggaaaagcaaatgttattttaccaaaaagctcacag
agtggaataactcatgtgattgccagtaatgcaagaatcaaggctgagcaagaaaaagac
cattttaaggctccattttatccaattcagtatctaggggattttcttttagagaaagaa
attcagaatgatgaagattcccagagcaattctgtttggcataaacatggcaatcaggaa
aaaaacaaagatttctggaaagatatgggatttcttgaaatgaaaggtgccttaaaagag
accatgtgtagaacccagaaagaaatccaaaatcacaatgaagatgttaatgttagttct
cttttgactgaacatcacaaaaaagaaaaactcagagattccaggaaaggtttaaaattt
gttaaaatgagaggtgccttaagaagacacacatgtggaactcagaaggaaattaagaaa
aaggatgaagatatacaaaggagctatactttgaggaaaaaacgcaaaaaagaaaatgaa
agagattccaggaaagacatcgaacataacaaaattagaagtacctcaagaaagcacgta
tacagagatcagaaagaaatgaagaattctgtttttgctgatcgtgccaaagaatcaaaa
accaaggatgtcgagacagatgtggatattgctgaaataaaaaatgacttaaggaagcac
atatacagagctcaggctatcagatacagctgcattagaatagataaacaaccagtgtac
aacatcgaggttaaaaatgctgaatttcccaggggtgtattgaatttaattgaaagtctc
atagaaggacagttttttaaagaagcaattgaagaactttcctctttacaagcacattat
atccctcctgtatgccttcttcatgctctactagagaacattctacaggataacatagat
acattttctggccgatactttcatatattgtcagctctccttcacctacatcctccttgg
aagtctccagccatgtcgcgatattacctggagctgtttcagtgtccaacttgtatgaaa
ggagcatggtctctaattgaagtgcttatcaggtcttgtctttacaatgaaagtttttgc
catcaaatttcaaaaaatattattggtacgaaggtgctctacctgaccctgctcaaattc
ttctttaatttggtggaaagtgaagtgcgacatctgagccaaaagttgtatgactggtca
gattctcagagtctgaaaataacaggaaaggcaattcttcttgaaatcttttggtcagga
aatgaggcctctgggcttttgaccaaaccagtaaatatgcttttggagtggactatatat
tctcacaaggaaaaatgcaagtctaatgatgtcttcaaacatgaattagcttatttactg
actggaattcttggagcagcaatagattattggatcttccttggtcttaaaaagggtaaa
aatgtgatgcgacatatgtctgatgacttgggaagttatgtttccctttcgtgtgatgac
tttacttcacaggaattagagattttcatttgttccttttcctcctcctggcttcaaatg
tttgttgcagaggccgtctttaaaaagttgtgtttacagagttccatcagtatttcttct
gagccactctctcttcagaaaatggtgtattcctatttgccagctctggggaagactggt
gtgcatgggactggaaagatgcagataccaaagaaaacgggacagcggccttgccttgaa
tctcagagagccttattaatgctaaatggtacaaaacagaaacaagttgaagggctgcca
gagttaccagagctgaaccttgctaaatgttcctcatcgttaaaaagattgaaaaagaaa
tcagaaggagaattatcatgttccaaggagaattgcccctctttagttacaaagatgaat
tttcacaagactaatctaaaaggagaaacagccctccatagagcttgcataaataaccaa
gtggagaaattgattcttcttctctctttgccaggaatagacatcaatgttaaagacaat
gctggctggacgcctttgcatgaagcctgtaactatggcaacacagtgtgtgtccaggaa
attttgcaacgttgtccagaggtagatctgctcactcaagtggacggggtgactcctttg
catgatgcactgtcaaacggacatgtagaaattggcaagctgctactacagcatgggggc
ccagtgcttttacagcagagaaactctaagggagaattgcccttggattatgtggtatca
tctcaaatcaaggaagaactatttgctattacaaaaatagaagatacagtggagaacttt
catgcccaagcagagaaacatttttaccaccagcaacttgaattcggctcatttttactt
agtaggatgttgctaaatttttgttcaatttttgatttatcttcagagttcctcttagct
ttcaaagggttaactcacctaaatgagctgcttgtggcttgtaagaattataaggaaact
accagtgctcatgctgactggttattggatctctatgctagaaatataaagacattgcag
acgcttccaaatattcttaaggaactgcctgagaatttaaaagtgtgccctggagtgcac
actgaggccttattggtgacattggaaatgatgtgtcgttcagtcacagagttttcatga
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