Citrobacter freundii: CFNIH1_16470
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Entry
CFNIH1_16470 CDS
T03077
Name
(GenBank) hypothetical protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cfd
Citrobacter freundii
Pathway
cfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFNIH1_16470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfd03400
]
CFNIH1_16470
Enzymes [BR:
cfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CFNIH1_16470
DNA repair and recombination proteins [BR:
cfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CFNIH1_16470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AHY13056
LinkDB
All DBs
Position
complement(3416592..3417398)
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AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDHET
KFPAKAAFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMERLLGWGLVDTYRHAYPEKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLAER
CEETGIDYEIRSMEKPSDHAPVWAKFRV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaacggcctgcgtgcccgtcctcatcaactggcagcc
attgtcgaaaaacaccaaccggatgtgattggcttacaggagacaaaagtccacgacgac
atgttccctctcgaagaggtagcaaagctgggttacaacgtcttttatcatggtcagaaa
ggtcattacggcgtggcgctgctaacgaaagaaacgccaatcgcagtgcgtcgtggcttc
ccggacgatggcgaagaagcgcagcgtcgtatcatcatggcggaaatcccatcccctctg
ggcagcattaccgtgatcaacggctatttcccgcagggcgaaagccgtgaccacgaaacc
aaatttccggccaaggccgcgttttaccagaatctacaaaactatctggagactgaactg
aaacgcgacaatccggtcttgatcatgggcgatatgaacatcagcccaaccgatctcgat
atcggcattggcgaggaaaaccgtaaacgctggctgcgtaccggtaaatgttccttcctg
ccggaagagcgtgagtggatggagcgcctgctgggctggggcctggtggatacctatcgt
catgcttatcctgaaaaaaatgaccagttctcgtggtttgattaccgctccaaaggcttt
gatgataaccgtggcctgcgtatcgatctgctgttagcgagcaacccactggcggagcgc
tgcgaagaaaccggcatcgactatgagatccgcagcatggaaaaaccgtccgatcatgcg
ccggtatgggctaaattccgcgtctga
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