KEGG   Cellulomonas flavigena: Cfla_0933Help
Entry
Cfla_0933         CDS       T01230                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cfl  Cellulomonas flavigena
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:cfl00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Cfla_0933
   03410 Base excision repair
    Cfla_0933
   03420 Nucleotide excision repair
    Cfla_0933
   03430 Mismatch repair
    Cfla_0933
Enzymes [BR:cfl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Cfla_0933
    6.5.1.6  DNA ligase (ATP or NAD+)
     Cfla_0933
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Cfla_0933
DNA replication proteins [BR:cfl03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Cfla_0933
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Cfla_0933
DNA repair and recombination proteins [BR:cfl03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Cfla_0933
   NER (nucleotide excision repair)
    Other NER factors
     Cfla_0933
   MMR (mismatch exicision repair)
    Other MMR factors
     Cfla_0933
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(1021204..1022772)
Genome map
AA seq 522 aa AA seqDB search
MLLDDVADASAQVAATRSRLAKRAVLVDVLRRVAADGPDDVAIVSRYLGGELRQRRTGLG
WRSLASMPGAAEVPSLSVHDVDAAFAGMAVLAGPGSATARTEAARALFAAATEREQHLLR
GLVSGELRQGALDALLLDAVAEAAGVPADVVRRAAMLAGETEAVAVAALGAASPDDARTA
LDAFALTVGRPVRPMLAQSAPDVPTAVAQLGERAGTAESPAAQVVVDTKLDGIRIQVHRD
GDDVRVWTRSLDDITARVPEIVAAVRGLPARALVLDGEALALDADGRPRPFQETASRSAT
RDAELAGSATLTPFFFDVLHVDGRDLLDAPLRERLAVLDQVAAPHVVARVVTADPAVATE
HFRAVVAAGQEGVVVKAADAPYEAGRRGAAWVKVKPRHTLDLVVLAVERGSGRRAGTLSN
IHLGARDPATGGFVMLGKTFKGMTDEMLAWQTQRFRELEVADDGWTVTLRPEQVVEIAFD
GLQRSTRYPGGLALRFARVLRYRDDKPAAEADTIETVHGYLT
NT seq 1569 nt NT seq  +upstreamnt  +downstreamnt
atgctcctcgacgacgtcgccgacgcgtccgcgcaggtcgcggccacgcgctcgcggctg
gccaagcgggcggtgctcgtcgacgtgctgcggcgggtcgctgcggacgggccggacgac
gtcgcgatcgtgtcgcgctacctcggcggcgagctgcggcagcgccgcaccgggctcggg
tggcgttcgctcgcgtcgatgccgggagcggccgaggtcccgtcgctcagcgtgcacgac
gtcgacgcggcgttcgcgggcatggccgtgctcgccgggccggggtcggcgacggcccgc
accgaggcggcgcgggcgctgttcgccgcggcgaccgagcgcgagcagcacctgctccgg
ggtctcgtgagcggcgagctgcggcagggcgcgctcgacgccctgctgctcgacgcggtc
gccgaggccgcgggcgtccctgccgacgtggtgcggcgcgccgcgatgctcgcaggcgag
accgaggcggtggcggtcgctgcgctcggtgcggcctcccccgacgacgcgcggacggcg
ctcgacgcgttcgcgctcaccgtgggacgtccggtgcggccgatgctcgcgcagtcggcg
cccgacgtaccgacggcggtcgcgcagctcggcgagcgcgccggcaccgccgaatcgccc
gccgcccaggtcgtcgtcgacacgaagctcgacggcatccgcatccaggtgcaccgcgac
ggtgacgacgtgcgcgtctggacccgcagcctcgacgacatcacggcgcgcgtgcccgag
atcgtcgcggccgtgcggggactgccggcgcgcgcgctcgtcctggacggcgaggccctc
gcgctcgacgccgacggccgtccacgcccgttccaggagaccgcgtcccgcagcgcgacg
cgtgacgccgagctcgccgggtccgcgacgctcacgccgttcttcttcgacgtcctgcac
gtcgacggccgcgacctgctcgacgccccgctgcgcgagcgcctcgcggtgctcgaccag
gtcgccgcgccgcacgtcgtcgcgcgcgtcgtcaccgccgacccggccgtcgccaccgag
cacttccgcgccgtcgtcgcggccggtcaggagggcgtcgtcgtcaaggccgccgacgcg
ccgtacgaggcggggcgccgcggcgccgcgtgggtcaaggtcaagccgcggcacacgctc
gacctcgtcgtgctcgccgtcgagcgcgggtcggggcggcgcgccgggacgctgtcgaac
atccacctcggcgcacgcgaccccgcgaccggcgggttcgtcatgctcggcaagacgttc
aagggcatgaccgacgagatgctcgcctggcagacccagcggttccgcgagctcgaggtc
gccgacgacgggtggaccgtgacgctgcggccggagcaggtcgtcgagatcgccttcgac
gggctgcagcgctcgacgcgctaccccggtggcctggccctgcgcttcgcgcgcgtcctg
cgctaccgcgacgacaagcctgccgccgaggcggacacgatcgagacggtgcacggatac
ctcacgtag

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