KEGG   Camelus ferus (Wild Bactrian camel): 102506715
Entry
102506715         CDS       T02979                                 
Symbol
SYMPK
Name
(RefSeq) LOW QUALITY PROTEIN: symplekin
  KO
K06100  symplekin
Organism
cfr  Camelus ferus (Wild Bactrian camel)
Pathway
cfr03015  mRNA surveillance pathway
cfr04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cfr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102506715 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102506715 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfr03021]
    102506715 (SYMPK)
   03019 Messenger RNA biogenesis [BR:cfr03019]
    102506715 (SYMPK)
Transcription machinery [BR:cfr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102506715 (SYMPK)
Messenger RNA biogenesis [BR:cfr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     102506715 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     102506715 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Cohesin_HEAT
Other DBs
NCBI-GeneID: 102506715
NCBI-ProteinID: XP_032341642
UniProt: A0A8B8THG3
LinkDB
Position
9:15326092..15360227
AA seq 1274 aa
MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEVMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQYKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSALEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGATGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPETKETPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSLSSSSARPGPPQPEEAIDFREEGPECET
PAIFISMDDDSGLTEAALLDSSLEGPLPKEVAAGGLISKEERSPQTLTPAGEDTLKTPSP
TVEEAGEPETKGNS
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggcaggcagcagtggggacagcgtcacccgccggagcgtggcatcacagtttttcaca
caagaggaggggccgggcattgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcagcactgatcaccaatgattcaaagatcacggtgctcaaacaggtccaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgcattc
caagcagacaagtcgattgaagtgcgcaaatttgtcatcggcttcattgaggaggcatgc
aagcgagacattgagttgctgctgaaactgattgcgaacctcaacatgcttttaagagat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagtgagctccaggaggcctgctgggacatg
gtgtctgccatggctggggacatcatcctgctgttggactctgacaatgacggcatccgt
acccacgccatcaagtttgtggagggcctcatcgtcaccctgtcaccccgaatggctgac
tcggaagtgccccgacgccaggagcatgacatcagcctggaccgcatccctcgtgaccat
ccctacatccagtacaatgtgctgtgggaagaaggcaaggcagccttagagcagctgctc
aagttcatggtgcaccccgctatctcctccatcaacctgaccacagccctgggctccctc
gccaatattgcccgccagagacccatgtttatgtctgaggtgattcaggcttacgaaacc
ctgcacgccaacctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgagtgtgctgaagcacccagcctccttggagttccaggctcag
atcaccaccctgctggtagacctgggcacacctcaggctgagatcgcccgcaatatgccc
agtggcaaggatgcccgcaagcggccccgagacgactcagattccacgctcaagaagatg
aagctggagcccaacctgggggaagacgacgaggacaaggacttggagccaggcccctca
gggacctcgaaggcctctgcccagatctccggccagtcagacacagacatcacagctgag
ttcctacagcctctgctgacgccggacaatgtggccaatctggtcctcatcagcatggtg
tacctgcctgaggtcatgcccgcctccttccaagccatctacaccccagtggagtcagca
ggcactgaagcccagatcaaacacctggctcggctcatggccacacagatgacagccgca
ggactggggccaggggtggagcagaccaaacagtacaaagaggagcccaaggaggagaag
gtggtgaagccggaaagcgtcctgatcaagcgacgcctgtcagcccagggccaggcgatc
tcggtggtgggctccctgagttccatgtccgctctggaggaggaggcaccccaggccaag
aggaggccagagcccatcatccctgtcacgcagccccggctggcaggtgccggagggcgt
aagaaaatcttccgtctgagcgatgtgctgaagcccctgactgacgcccaggttgaggcc
atgaagctgggcgctgtgaagcggatcctacgggctgagaaggctgtggcgtgcagcggg
gctgcccaggtgcgcataaagatcctggctagcctggtgactcagttcgactcgggcctg
aaggctgaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctagcagctggtgccacgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggcctgcaggagaagccagaccagaag
gatgggatcttcaccaaggttgtactagaggcaccactgatcaccgagagcgccttggag
gtgattcgcaagtactgcgaggatgagagtcgcacctacctgggcatgtccactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccatgagaaggacaaggtgcgttcccaagccttgctgttcatcaagcgcatgtac
gagaaggaacagctgcgagagtatgtggagaaatttgcccttaactacctgcagctcttg
gtccaccccaatccaccatctgtgctgtttggagccgacaaggacacagaggtggcagcg
ccctggaccgaggagacagtgaagcagtgtttgtacctctacctggccctcctgcctcag
aaccacaagctgatccacgagctggcagccgtgtacactgaagccatcgctgacatcaag
aggacagtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcgccagag
ctgctcttgctggtggaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacggacaaagtcccaccctccccggagctggtgaagcgggtcagggatctc
taccacaagcgactgccagacgtccgcttcctcatccctgtgctcaatgggctggaaaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccatagtggtgaaagag
gtcttcaaccgcctgctgggcacccagcatggtgaagggaactcggccttgtcccccctg
aaccctggagagcttctgatcgccttacacaacattgactcggcaaagtgtgacatgaag
tctatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaaa
tgctgtcagcgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggtgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccgc
tccttcactccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agcggcaagcaggagccagagactaaggaaacacctgccgggcccctggaagaggatgac
ttagagcccctggctctggcaccacccccggccccccggccccctcaagacctgatcggc
ctgcggctggcccaggagaaggccttaaagcggcagctggaggaggaacagaagctgaag
cctgggggtgtgggagccccctcctcgtcctcctcgttgtcctcttcctcagcccggcca
ggccctccccagcccgaggaagccattgatttccgggaggaggggcctgagtgtgagacc
ccggccatttttatcagcatggatgatgactcggggctgacggaggctgcactgctggac
tctagtcttgagggacccctacctaaggaagtggcagcgggcggattgatttcaaaggag
gagcggagcccccagaccctcacccctgccggagaagacaccctaaagacccccagcccc
accgtggaggaagccggggaacctgagaccaaggggaacagctga

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