Camelus ferus (Wild Bactrian camel): 102506715
Help
Entry
102506715 CDS
T02979
Symbol
SYMPK
Name
(RefSeq) LOW QUALITY PROTEIN: symplekin
KO
K06100
symplekin
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr03015
mRNA surveillance pathway
cfr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102506715 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102506715 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfr03021
]
102506715 (SYMPK)
03019 Messenger RNA biogenesis [BR:
cfr03019
]
102506715 (SYMPK)
Transcription machinery [BR:
cfr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102506715 (SYMPK)
Messenger RNA biogenesis [BR:
cfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102506715 (SYMPK)
U7-dependent histone pre-mRNA processing factors
102506715 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
102506715
NCBI-ProteinID:
XP_032341642
UniProt:
A0A8B8THG3
LinkDB
All DBs
Position
9:15326092..15360227
Genome browser
AA seq
1274 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEVMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQYKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSALEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGATGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSAKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPETKETPAGPLEEDDLEPLALAPPPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSLSSSSARPGPPQPEEAIDFREEGPECET
PAIFISMDDDSGLTEAALLDSSLEGPLPKEVAAGGLISKEERSPQTLTPAGEDTLKTPSP
TVEEAGEPETKGNS
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagtggggacagcgtcacccgccggagcgtggcatcacagtttttcaca
caagaggaggggccgggcattgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcagcactgatcaccaatgattcaaagatcacggtgctcaaacaggtccaggaa
ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgcattc
caagcagacaagtcgattgaagtgcgcaaatttgtcatcggcttcattgaggaggcatgc
aagcgagacattgagttgctgctgaaactgattgcgaacctcaacatgcttttaagagat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtgatcagtgagctccaggaggcctgctgggacatg
gtgtctgccatggctggggacatcatcctgctgttggactctgacaatgacggcatccgt
acccacgccatcaagtttgtggagggcctcatcgtcaccctgtcaccccgaatggctgac
tcggaagtgccccgacgccaggagcatgacatcagcctggaccgcatccctcgtgaccat
ccctacatccagtacaatgtgctgtgggaagaaggcaaggcagccttagagcagctgctc
aagttcatggtgcaccccgctatctcctccatcaacctgaccacagccctgggctccctc
gccaatattgcccgccagagacccatgtttatgtctgaggtgattcaggcttacgaaacc
ctgcacgccaacctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac
ctcaagttgcacctgttgagtgtgctgaagcacccagcctccttggagttccaggctcag
atcaccaccctgctggtagacctgggcacacctcaggctgagatcgcccgcaatatgccc
agtggcaaggatgcccgcaagcggccccgagacgactcagattccacgctcaagaagatg
aagctggagcccaacctgggggaagacgacgaggacaaggacttggagccaggcccctca
gggacctcgaaggcctctgcccagatctccggccagtcagacacagacatcacagctgag
ttcctacagcctctgctgacgccggacaatgtggccaatctggtcctcatcagcatggtg
tacctgcctgaggtcatgcccgcctccttccaagccatctacaccccagtggagtcagca
ggcactgaagcccagatcaaacacctggctcggctcatggccacacagatgacagccgca
ggactggggccaggggtggagcagaccaaacagtacaaagaggagcccaaggaggagaag
gtggtgaagccggaaagcgtcctgatcaagcgacgcctgtcagcccagggccaggcgatc
tcggtggtgggctccctgagttccatgtccgctctggaggaggaggcaccccaggccaag
aggaggccagagcccatcatccctgtcacgcagccccggctggcaggtgccggagggcgt
aagaaaatcttccgtctgagcgatgtgctgaagcccctgactgacgcccaggttgaggcc
atgaagctgggcgctgtgaagcggatcctacgggctgagaaggctgtggcgtgcagcggg
gctgcccaggtgcgcataaagatcctggctagcctggtgactcagttcgactcgggcctg
aaggctgaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctagcagctggtgccacgggcaccctggac
aagtatgaggactgcctcatccgcctgctctccggcctgcaggagaagccagaccagaag
gatgggatcttcaccaaggttgtactagaggcaccactgatcaccgagagcgccttggag
gtgattcgcaagtactgcgaggatgagagtcgcacctacctgggcatgtccactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccatgagaaggacaaggtgcgttcccaagccttgctgttcatcaagcgcatgtac
gagaaggaacagctgcgagagtatgtggagaaatttgcccttaactacctgcagctcttg
gtccaccccaatccaccatctgtgctgtttggagccgacaaggacacagaggtggcagcg
ccctggaccgaggagacagtgaagcagtgtttgtacctctacctggccctcctgcctcag
aaccacaagctgatccacgagctggcagccgtgtacactgaagccatcgctgacatcaag
aggacagtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcgccagag
ctgctcttgctggtggaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacggacaaagtcccaccctccccggagctggtgaagcgggtcagggatctc
taccacaagcgactgccagacgtccgcttcctcatccctgtgctcaatgggctggaaaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccatagtggtgaaagag
gtcttcaaccgcctgctgggcacccagcatggtgaagggaactcggccttgtcccccctg
aaccctggagagcttctgatcgccttacacaacattgactcggcaaagtgtgacatgaag
tctatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaaa
tgctgtcagcgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag
ctgggtgccgtctttgacaagtgcccagagctccgggagcccctgctggcccacgtccgc
tccttcactccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agcggcaagcaggagccagagactaaggaaacacctgccgggcccctggaagaggatgac
ttagagcccctggctctggcaccacccccggccccccggccccctcaagacctgatcggc
ctgcggctggcccaggagaaggccttaaagcggcagctggaggaggaacagaagctgaag
cctgggggtgtgggagccccctcctcgtcctcctcgttgtcctcttcctcagcccggcca
ggccctccccagcccgaggaagccattgatttccgggaggaggggcctgagtgtgagacc
ccggccatttttatcagcatggatgatgactcggggctgacggaggctgcactgctggac
tctagtcttgagggacccctacctaaggaagtggcagcgggcggattgatttcaaaggag
gagcggagcccccagaccctcacccctgccggagaagacaccctaaagacccccagcccc
accgtggaggaagccggggaacctgagaccaaggggaacagctga
DBGET
integrated database retrieval system