Collimonas fungivorans: CFU_3441
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Entry
CFU_3441 CDS
T01583
Symbol
truB
Name
(GenBank) tRNA pseudouridine 5S synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfu03016
]
CFU_3441 (truB)
Enzymes [BR:
cfu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CFU_3441 (truB)
Transfer RNA biogenesis [BR:
cfu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFU_3441 (truB)
Prokaryotic type
CFU_3441 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AEK63265
UniProt:
G0AD81
LinkDB
All DBs
Position
complement(4018741..4019748)
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AA seq
335 aa
AA seq
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MRPGTASRFRFLLLHPLPMASRPPKRIRVPLNGVLLLDKPVGFSSNDALIKAKGLLNAQK
AGHTGTLDPFATGVLPLCFGEATKFAQDLLDADKTYETLIHLGVSTTTGDTEGEVLERKD
VSVSRAQIDAVLAQFRGPIKQVPPMYSALKRDGKPLYEYARAGITLEREARDVSIHTLEF
LAYEAPFLRLRVACSKGTYIRVLGEDIGAALGCGAHLQELRRIQVGHLTLDGCVTLEQLD
ATGQAERSALLAPVDSLLLTFPEVLLSEPLAKRFLQGQRLTLAKEGVALPADAGRVRVYL
QPADAVSVRQLLGTAQLHEYGVLAPERLIATAQPA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctggcacagcaagccgtttccgctttctccttttgcatccgctaccaatggca
tcacgcccacccaaaagaatccgtgtcccgctcaacggcgtcctgctgctggacaagccc
gtcggcttctccagcaacgacgcattgatcaaggccaaaggcttgctcaatgcgcagaag
gccgggcataccggcaccctcgatccgttcgccactggcgtgctgccgctgtgcttcggc
gaggccaccaagtttgcccaggacctgctggatgccgacaagacgtacgagacgctgatc
cacctgggagtgagcactaccaccggcgataccgaaggcgaagtgctggagcgcaaggat
gtcagcgtcagccgcgcgcagatcgatgccgtgctggcgcagttccgcggcccgatcaag
caggtgccgccgatgtactcggcgctcaagcgcgacggcaagccgctgtacgaatacgcc
cgggctggcattaccctggagcgcgaagcgcgcgacgtcagcatccacacattggaattc
ctggcctacgaggcgccgttcctgcgtttgcgcgtggcctgcagcaaaggcacttacatc
cgcgtgctgggcgaagacatcggcgctgccctgggctgcggcgcgcatctgcaggagttg
cggcggatccaggtgggccacctgacgctggatggctgcgtcaccctggagcagctggac
gccaccggccaggccgagcgcagcgccttgctggcgccggtcgacagcctgctgctgact
tttcccgaggtgttgttatccgaaccactggccaaacgcttcctgcaaggccagcgcttg
acgctggcaaaagaaggcgtggccctgccggcagacgccggacgcgtgcgggtctacctg
cagcctgcggatgcagtctccgtccggcaactgctgggcaccgcgcaactgcatgagtac
ggggtcctggctcccgaacgcctgatcgccaccgcgcagcctgcgtaa
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