Campylobacter fetus subsp. venerealis 97/608: CFV97608_0387
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Entry
CFV97608_0387 CDS
T03351
Symbol
addA
Name
(GenBank) AddAB recombination complex, helicase AddA
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cfx
Campylobacter fetus subsp. venerealis 97/608
Pathway
cfx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFV97608_0387 (addA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfx03400
]
CFV97608_0387 (addA)
Enzymes [BR:
cfx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CFV97608_0387 (addA)
DNA repair and recombination proteins [BR:
cfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFV97608_0387 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
Cas_Cas4
PDDEXK_1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIR80053
LinkDB
All DBs
Position
356703..359468
Genome browser
AA seq
921 aa
AA seq
DB search
MSFSRYLALEASAGSGKTFALSVRFIALILQGNDIAKILALTFTKKAANEMKSRIIDAFC
NLHESSKKNELNELEKILELSAVDILSLRDKYMGNFLKNELKISTFDSFFTMILRQFSLN
LGIMPDFKAGTSLNGLTRSEFIKNLKQNHLLESFAFYIKETNSNKNRVFETLELLYENIS
LPSFGENSKIPDESYVFAKFSELKSLALEISSDKNFLKNFEANTVSQIAGKPLIKEFDSK
KYFEKAALNAKFMMIRDELISNLKKYYLEYEQFKINELLKFIYLYKYSRFEAIKKENALD
FIDVTRLVYELLGNIDSDMLYFRLDDRIKHILIDEFQDTNIIQYDILLPLIEETLSGSGQ
NDIGSFFYVGDIKQSIYRFRGGRKELFSRLRNSYKQIETLSLESNYRSAKNIVNFVNQTF
SNKIKYYKTQLSCLENEGYVEVCEFVSDEFYDTLFQKIEFFVKNGVRYDDIAILCWKNSD
IINIKDKLEKSGVPVATGGSNLLINSANVRVVLNFIKYCLFGDEIYIYSVHEFIGEKKSK
LSLNATAELASTLKFVASYLNLECFDKNLLKLYEISLGYADIFDFIFNIQNDQTPSADTS
HCGITLLTVHKSKGLEFDHVIVADRLSRAGSNIDVFITEYNNSEQKWDIKLNDSALQNLG
DSEFINLKQKCKDLDYEEDINKLYVALTRAKNSLIVMSKLDSNGLKPSYFKAFTSSKEQI
CYLDLKPFSVGKIEPSKTSMSFYGGLERLEEFETIKKQAVSDKQNDEYELNLESIYFGEA
LHYCLEMIFDFEEENLKNAKTALINQFGAILSKNSIEDIINRVLNLINSVEFKNIIKDKN
ILKEQDIAFNQVIKRLDLLCIGDDEIVVMDYKSSKKFITQNEDQVREYMSILSQIYPQKR
VVGKIIYLLNDKVEFLNVDLI
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttctcgttatttggctttagaggctagcgcaggaagtggaaaaacatttgct
ttgtccgttagatttatagctcttattttgcaaggcaacgatatagcaaaaattcttgct
ctaacatttacaaaaaaagcagcaaatgagatgaaaagtcgtattatagatgctttttgc
aatttgcacgaaagtagtaaaaaaaacgaattaaacgaacttgaaaagattttagagctt
agtgctgtagatattttgagtttaagagataaatatatgggtaattttttaaaaaatgaa
cttaaaatttctacgtttgattcgttttttacgatgattttacggcagtttagtttaaat
ctcggtatcatgccagatttcaaagcgggaactagtttaaatggtttaacaaggtctgaa
tttataaaaaatttaaaacaaaatcatcttttagaaagctttgcattttacataaaagag
acaaatagcaataaaaatagagtattcgaaacgctagagcttctgtatgaaaacattagt
ttgcctagttttggtgagaattcaaagattcctgatgaatcttatgtttttgctaaattt
agtgagttaaaaagtttagctttagagatttcatcggataaaaatttcttgaaaaatttt
gaagctaacaccgtttctcagatcgccggtaaaccgcttattaaagagtttgattcaaaa
aaatattttgaaaaagccgctttaaatgcaaaatttatgatgattagggatgagcttatt
tcaaatttaaaaaaatattatttggagtatgagcagtttaaaatcaatgagcttttgaag
tttatttatctatataaatatagtagatttgaagcgataaaaaaagaaaatgcgcttgat
tttatagatgttacaaggctggtttacgagttattaggcaatatagatagtgatatgcta
tattttagacttgatgatagaataaaacatatacttatagatgaattccaagatacaaat
ataattcagtatgatatacttttaccccttattgaagagactcttagcggaagtgggcaa
aatgatataggaagctttttttatgtcggagatattaaacagagtatttataggtttaga
ggaggcaggaaagagctattttctagactaagaaacagctataaacaaatagagacttta
agtcttgagagtaactatagaagcgctaaaaatatagtaaattttgtaaatcaaacattt
agtaataaaataaaatattataaaactcaattatcgtgcttagaaaatgaaggttacgtc
gaagtttgtgagtttgttagcgatgagttttatgatactctttttcaaaagatagaattt
tttgtcaaaaacggtgttagatatgacgatatagctatactttgctggaaaaatagcgat
atcataaatatcaaagataagttagaaaagtccggcgtaccggtggctactggaggctca
aatttacttataaactcagctaatgttagagtcgttttgaattttattaaatactgttta
ttcggtgatgagatatatatttatagtgttcacgagtttataggggagaaaaaatccaag
ctgagcttaaatgccacagcagagcttgctagtacgcttaaatttgtagcaagttatctg
aatttagagtgttttgataagaatttacttaaactttatgagattagcttgggatatgca
gatatatttgattttatatttaatatacaaaacgatcaaactccaagtgccgacactagc
cattgcggtattactttgcttactgtgcataagagtaaagggcttgagttcgatcacgtt
atagtagccgatagacttagtagagccggctcaaacatagacgtatttataaccgaatac
aataattcagagcaaaaatgggatataaagctaaatgatagtgcactccaaaatctcgga
gatagcgagtttataaatttaaaacagaagtgcaaagatcttgattatgaagaggatatc
aacaaactttatgtagcgttaacaagagctaaaaatagtttgattgttatgtcgaagttg
gattcaaacggcttaaaaccgtcatattttaaagcatttaccagctccaaagagcaaatt
tgttaccttgatctaaagccatttagcgtcggcaagatcgagcctagtaaaacaagtatg
agtttttatggaggacttgagcgcctagaagagtttgaaactataaaaaaacaagctgtt
agcgataaacaaaatgatgaatatgagctgaatttagaatctatatactttggagaagcg
ctgcattactgtcttgaaatgatttttgattttgaagaagaaaatttaaaaaacgcaaaa
acagctctgataaatcaatttggagccattttatccaaaaatagtatagaagatattata
aatagggttctaaatttgataaatagcgttgagtttaaaaatataataaaagataaaaat
attttaaaagagcaagatatcgcatttaaccaagttatcaaaagacttgatctgctttgc
ataggagatgatgaaatagtagtaatggactataaaagttcaaagaaattcataactcaa
aatgaagatcaagttagagaatatatgagcatcttatctcaaatttatcctcaaaaaaga
gttgtcgggaaaattatttatcttctaaacgataaagtagagtttttaaatgtagattta
atctaa
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