Cricetulus griseus (Chinese hamster): 100753701
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Entry
100753701 CDS
T02813
Symbol
Tnr
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04151
PI3K-Akt signaling pathway
cge04510
Focal adhesion
cge04512
ECM-receptor interaction
cge05165
Human papillomavirus infection
cge05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100753701 (Tnr)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100753701 (Tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100753701 (Tnr)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100753701 (Tnr)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100753701 (Tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cge00536
]
100753701 (Tnr)
Glycosaminoglycan binding proteins [BR:
cge00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100753701 (Tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
Pur_ac_phosph_N
EGF_2
EGF
Motif
Other DBs
NCBI-GeneID:
100753701
NCBI-ProteinID:
XP_027273071
UniProt:
G3GZM2
LinkDB
All DBs
Position
5:complement(32122578..32197698)
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AA seq
1358 aa
AA seq
DB search
MGIDGETVVLKNMLIGVNLILLGSMLKPSECRLEVTTERVQRQTVEEEGGTSSYNTSSKE
QPMVFNHVYNINVPLESLCSSGLETSAEQEVSTEDDTLAEYIGQTSDHESQVTFTHRINL
PKKACPCASSAQMLQELFNRIELLEREVSLLRDQCNTNCCQESAATGQLDYVPHCSGHGN
FSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCRELRCPEDCSGKGQCANGTCLCQEGYAGEDCSQRRCLNG
CSGRGHCQEGLCICEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PMALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHVSTPQG
LQFKTITETTVEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGRTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDATSTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTRTTLTDLVPGT
EYGVGISAVMNSKQSIPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPRDRTSYTLTNLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDDEEETMEVLLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKNITISNVTKDSVRVSWSSPVAPFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITRLYPATEYEISLNSVRGREESERICTLVHTAMDSPVDLI
ATNITPTEALLQWKAPMGEVENYVIVLTHFAIAGETILVDGVSEEFQLVDLLPSTHYTVT
MYATSGPLMSGTITTNFSTLLDPPSNLTASEVTRQSALISWQPPRAEIENYVLTYKSTDG
SRKELIVDAEDTWIRLEGLSENTDYTVLLQAAQDATRSSLTSTAFTTGGRVFSHPQDCAQ
HLMNGDTLSGVYTIFLNGELSHKLQVYCDMSTDGGGWIVFQRRQNGQTDFFRKWADYRVG
FGNLEDEFWLGLDNIHRITAQGRYELRVDMRDGQEAAFAYYDKFAVEDSRSLYKLRIGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRPTAGRKRRALKF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgatggggaaacagtggtcttgaagaacatgctcattggtgtaaacctgatt
ctgctgggatccatgctcaagccatctgagtgtcggctggaggtgaccactgaacgggtc
cagagacaaactgtggaggaggaaggagggacttccagctacaacacatccagcaaggaa
cagcctatggttttcaaccatgtgtacaacatcaacgtcccactggagagcctctgctcc
tcagggctggagacttcagcagaacaggaagtgagcactgaagatgatactctggcagaa
tacataggccaaacctcagatcacgaaagccaggtcaccttcacccacaggatcaacctc
cccaaaaaagcctgcccgtgtgccagctctgcccagatgctgcaggagctgttcaaccgg
atcgagttgctggagagggaggtgtccttgctgcgagaccagtgcaacacaaactgctgt
caggaaagcgcagccacaggacaactggactatgttcctcactgcagtggccatggcaac
tttagctttgagtcctgtggctgcatctgcaatgaaggctggtttggcaagaactgctca
gagccctactgcccactgggctgctccagtcggggtgtgtgtgtcgatggccagtgcatt
tgcgacagtgagtatagcggcgatgactgctctgagcttcggtgcccaacagactgcagt
tcccgggggctctgtgtggatggggaatgtgtctgtgaagagccctacacaggcgaggac
tgcagggagctccggtgccccgaggactgttcagggaaggggcaatgtgccaacggtacc
tgcctgtgccaagaaggctatgctggtgaggactgcagccagcgacggtgtctgaatggc
tgcagtgggcgaggacactgccaggagggcctctgcatctgtgaggagggctaccagggc
ccggattgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgatggccctggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccactcatgtctccactcctcaaggg
ctacagttcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttttcattc
cccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggtggggtgattgct
cagctccccagcgatgtaacctcctttaaccagacaggactgaaacctggagaggagtac
attgtgaatgttgtggctctaaaggaacaagcccgtagccctcctacctctgccagtgtc
tccactgtcattgatgggcccacgcagatcctagttcgagatgtctctgacactgtggcc
tttgtggagtggaccccacctcgagccaaagtagacttcattcttttgaaatacggctta
gtgggtggggaaggtgggaggaccaccttccggctgcagcctcccctaagccagtactca
gtgcaagcacttagacctggctcccgctatgaggtctctgtcagcgcagtccggggaacc
aatgaaagtgatgccacaagcacccaatttacaacagagattgatgctcccaagaatttg
cgagtgggctcccgcacagcaactagccttgaccttgagtgggataacagtgaggcagag
gctcaggagtacaaagttgtgtacagcaccctggcgggtgagcagtaccatgaagtactg
gtccccaagggcattggtccaactaccaggactaccctcacagatctggtgccaggcaca
gaatatggagttggaatatctgcagtcatgaactcaaaacaaagcattcctgctaccatg
aatgccagaactgaacttgacagtccccgagaccttatggtaacagcctcctcagagacc
tctatctctctcatctggacgaaggccagtggtcccattgatcactaccgaattactttt
accccatcttctgggatcgcctcagaagtcactgtgcctagggacaggacttcatataca
ctgacaaatctagagcctggagcagaatacatcatttctatcactgctgagaggggtcgg
cagcagagcctggagtccactgtggatgccttcacaggcttccgccctatctcccatttg
cacttttctcatgtgacctcctccagtgtcaacatcacctggagtgacccatctccccca
gcagacagactcattctgaactacagccccagagatgacgaggaagagacgatggaggtc
ctcttggatgccaccaagaggcatgccgtcctgatggggctgcagccagccactgaatat
atagtgaaccttgtagctgtgcatgggacagtaacctctgagcccattgtgggttccatc
accacaggaattgatccccccaaaaacatcacaattagcaatgtgactaaggattcagtg
agggtttcctggagctctcccgttgcaccttttgattactaccgagtgtcctaccgaccc
acacaagtgggacggctggacagctccgtggtgcccaacaccgtgacagagttcaccatc
accaggctatatccagctactgaatacgaaataagcctcaacagtgttcggggcagggag
gagagtgagcgcatctgcaccctggtgcacacagccatggatagccctgtggatctgatt
gctaccaacatcacccccacagaagccctgcttcaatggaaagcacccatgggtgaagtg
gagaactatgtcattgtcctcacacactttgcaattgctggagagaccatcctggttgat
ggagtcagtgaagaattccagcttgttgacctgcttcctagcacccactataccgtcacc
atgtatgccaccagtgggccactcatgagtggcactatcaccaccaacttctctaccctc
ctggatcctccttccaacctgacagccagcgaagtcaccaggcaaagtgcactcatctcc
tggcagccacccagagcagagattgaaaactatgtcttgacctacaaatccacagatggt
agccgcaaggagctgattgtggatgctgaggacacctggatccgactggagggcctgtca
gagaacacagactacacagtgctcctgcaggcagctcaggatgccacaaggagcagcctc
acctctactgccttcaccacagggggccgggtattctctcatcctcaagactgtgctcag
catttgatgaatggagatactctgagtggcgtttacaccatcttcctcaatggcgagcta
agccacaagctgcaagtatactgtgatatgagcacagatgggggcggctggattgtattc
cagaggcggcagaacggccaaactgattttttccggaaatgggctgattatcgtgttggt
tttgggaatctggaggatgagttttggctaggactagacaacatccacaggataacagcc
cagggccgctacgagttacgtgttgatatgcgggatggccaggaggcagcctttgcctac
tatgacaagtttgctgtagaggacagcagaagcctatacaagctccgtataggaggctac
aatggcactgcaggagactccctcagctatcaccagggacgccctttctccacagaggac
agagacaatgatgttgcagttaccaactgtgccatgtcatacaagggtgcttggtggtat
aagaactgccaccggaccaacctcaatgggaagtatggagagtccaggcacagtcaggga
atcaactggtaccattggaaaggccatgaattctccatcccctttgtagaaatgaagatg
aggccctacaaccatcgtcccacagccggaaggaaacggcgagccttgaaattctga
DBGET
integrated database retrieval system