KEGG   Cricetulus griseus (Chinese hamster): 100753701
Entry
100753701         CDS       T02813                                 
Symbol
Tnr
Name
(RefSeq) tenascin-R isoform X1
  KO
K06252  tenascin
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04151  PI3K-Akt signaling pathway
cge04510  Focal adhesion
cge04512  ECM-receptor interaction
cge05165  Human papillomavirus infection
cge05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:cge00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100753701 (Tnr)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100753701 (Tnr)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100753701 (Tnr)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    100753701 (Tnr)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100753701 (Tnr)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cge00536]
    100753701 (Tnr)
Glycosaminoglycan binding proteins [BR:cge00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100753701 (Tnr)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_Tenascin Pur_ac_phosph_N EGF_2 EGF
Other DBs
NCBI-GeneID: 100753701
NCBI-ProteinID: XP_027273071
UniProt: G3GZM2
LinkDB
Position
5:complement(32122578..32197698)
AA seq 1358 aa
MGIDGETVVLKNMLIGVNLILLGSMLKPSECRLEVTTERVQRQTVEEEGGTSSYNTSSKE
QPMVFNHVYNINVPLESLCSSGLETSAEQEVSTEDDTLAEYIGQTSDHESQVTFTHRINL
PKKACPCASSAQMLQELFNRIELLEREVSLLRDQCNTNCCQESAATGQLDYVPHCSGHGN
FSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCRELRCPEDCSGKGQCANGTCLCQEGYAGEDCSQRRCLNG
CSGRGHCQEGLCICEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PMALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHVSTPQG
LQFKTITETTVEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGRTTFRLQPPLSQYSVQALRPGSRYEVSVSAVRGTNESDATSTQFTTEIDAPKNL
RVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTRTTLTDLVPGT
EYGVGISAVMNSKQSIPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPRDRTSYTLTNLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDDEEETMEVLLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKNITISNVTKDSVRVSWSSPVAPFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITRLYPATEYEISLNSVRGREESERICTLVHTAMDSPVDLI
ATNITPTEALLQWKAPMGEVENYVIVLTHFAIAGETILVDGVSEEFQLVDLLPSTHYTVT
MYATSGPLMSGTITTNFSTLLDPPSNLTASEVTRQSALISWQPPRAEIENYVLTYKSTDG
SRKELIVDAEDTWIRLEGLSENTDYTVLLQAAQDATRSSLTSTAFTTGGRVFSHPQDCAQ
HLMNGDTLSGVYTIFLNGELSHKLQVYCDMSTDGGGWIVFQRRQNGQTDFFRKWADYRVG
FGNLEDEFWLGLDNIHRITAQGRYELRVDMRDGQEAAFAYYDKFAVEDSRSLYKLRIGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRPTAGRKRRALKF
NT seq 4077 nt   +upstreamnt  +downstreamnt
atggggatcgatggggaaacagtggtcttgaagaacatgctcattggtgtaaacctgatt
ctgctgggatccatgctcaagccatctgagtgtcggctggaggtgaccactgaacgggtc
cagagacaaactgtggaggaggaaggagggacttccagctacaacacatccagcaaggaa
cagcctatggttttcaaccatgtgtacaacatcaacgtcccactggagagcctctgctcc
tcagggctggagacttcagcagaacaggaagtgagcactgaagatgatactctggcagaa
tacataggccaaacctcagatcacgaaagccaggtcaccttcacccacaggatcaacctc
cccaaaaaagcctgcccgtgtgccagctctgcccagatgctgcaggagctgttcaaccgg
atcgagttgctggagagggaggtgtccttgctgcgagaccagtgcaacacaaactgctgt
caggaaagcgcagccacaggacaactggactatgttcctcactgcagtggccatggcaac
tttagctttgagtcctgtggctgcatctgcaatgaaggctggtttggcaagaactgctca
gagccctactgcccactgggctgctccagtcggggtgtgtgtgtcgatggccagtgcatt
tgcgacagtgagtatagcggcgatgactgctctgagcttcggtgcccaacagactgcagt
tcccgggggctctgtgtggatggggaatgtgtctgtgaagagccctacacaggcgaggac
tgcagggagctccggtgccccgaggactgttcagggaaggggcaatgtgccaacggtacc
tgcctgtgccaagaaggctatgctggtgaggactgcagccagcgacggtgtctgaatggc
tgcagtgggcgaggacactgccaggagggcctctgcatctgtgaggagggctaccagggc
ccggattgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgatggccctggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccactcatgtctccactcctcaaggg
ctacagttcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttttcattc
cccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggtggggtgattgct
cagctccccagcgatgtaacctcctttaaccagacaggactgaaacctggagaggagtac
attgtgaatgttgtggctctaaaggaacaagcccgtagccctcctacctctgccagtgtc
tccactgtcattgatgggcccacgcagatcctagttcgagatgtctctgacactgtggcc
tttgtggagtggaccccacctcgagccaaagtagacttcattcttttgaaatacggctta
gtgggtggggaaggtgggaggaccaccttccggctgcagcctcccctaagccagtactca
gtgcaagcacttagacctggctcccgctatgaggtctctgtcagcgcagtccggggaacc
aatgaaagtgatgccacaagcacccaatttacaacagagattgatgctcccaagaatttg
cgagtgggctcccgcacagcaactagccttgaccttgagtgggataacagtgaggcagag
gctcaggagtacaaagttgtgtacagcaccctggcgggtgagcagtaccatgaagtactg
gtccccaagggcattggtccaactaccaggactaccctcacagatctggtgccaggcaca
gaatatggagttggaatatctgcagtcatgaactcaaaacaaagcattcctgctaccatg
aatgccagaactgaacttgacagtccccgagaccttatggtaacagcctcctcagagacc
tctatctctctcatctggacgaaggccagtggtcccattgatcactaccgaattactttt
accccatcttctgggatcgcctcagaagtcactgtgcctagggacaggacttcatataca
ctgacaaatctagagcctggagcagaatacatcatttctatcactgctgagaggggtcgg
cagcagagcctggagtccactgtggatgccttcacaggcttccgccctatctcccatttg
cacttttctcatgtgacctcctccagtgtcaacatcacctggagtgacccatctccccca
gcagacagactcattctgaactacagccccagagatgacgaggaagagacgatggaggtc
ctcttggatgccaccaagaggcatgccgtcctgatggggctgcagccagccactgaatat
atagtgaaccttgtagctgtgcatgggacagtaacctctgagcccattgtgggttccatc
accacaggaattgatccccccaaaaacatcacaattagcaatgtgactaaggattcagtg
agggtttcctggagctctcccgttgcaccttttgattactaccgagtgtcctaccgaccc
acacaagtgggacggctggacagctccgtggtgcccaacaccgtgacagagttcaccatc
accaggctatatccagctactgaatacgaaataagcctcaacagtgttcggggcagggag
gagagtgagcgcatctgcaccctggtgcacacagccatggatagccctgtggatctgatt
gctaccaacatcacccccacagaagccctgcttcaatggaaagcacccatgggtgaagtg
gagaactatgtcattgtcctcacacactttgcaattgctggagagaccatcctggttgat
ggagtcagtgaagaattccagcttgttgacctgcttcctagcacccactataccgtcacc
atgtatgccaccagtgggccactcatgagtggcactatcaccaccaacttctctaccctc
ctggatcctccttccaacctgacagccagcgaagtcaccaggcaaagtgcactcatctcc
tggcagccacccagagcagagattgaaaactatgtcttgacctacaaatccacagatggt
agccgcaaggagctgattgtggatgctgaggacacctggatccgactggagggcctgtca
gagaacacagactacacagtgctcctgcaggcagctcaggatgccacaaggagcagcctc
acctctactgccttcaccacagggggccgggtattctctcatcctcaagactgtgctcag
catttgatgaatggagatactctgagtggcgtttacaccatcttcctcaatggcgagcta
agccacaagctgcaagtatactgtgatatgagcacagatgggggcggctggattgtattc
cagaggcggcagaacggccaaactgattttttccggaaatgggctgattatcgtgttggt
tttgggaatctggaggatgagttttggctaggactagacaacatccacaggataacagcc
cagggccgctacgagttacgtgttgatatgcgggatggccaggaggcagcctttgcctac
tatgacaagtttgctgtagaggacagcagaagcctatacaagctccgtataggaggctac
aatggcactgcaggagactccctcagctatcaccagggacgccctttctccacagaggac
agagacaatgatgttgcagttaccaactgtgccatgtcatacaagggtgcttggtggtat
aagaactgccaccggaccaacctcaatgggaagtatggagagtccaggcacagtcaggga
atcaactggtaccattggaaaggccatgaattctccatcccctttgtagaaatgaagatg
aggccctacaaccatcgtcccacagccggaaggaaacggcgagccttgaaattctga

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