Corynebacterium glaucum: CGLAU_05060
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Entry
CGLAU_05060 CDS
T05058
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgv
Corynebacterium glaucum
Pathway
cgv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGLAU_05060 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgv03019
]
CGLAU_05060 (deaD)
03009 Ribosome biogenesis [BR:
cgv03009
]
CGLAU_05060 (deaD)
Enzymes [BR:
cgv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGLAU_05060 (deaD)
Messenger RNA biogenesis [BR:
cgv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CGLAU_05060 (deaD)
Ribosome biogenesis [BR:
cgv03009
]
Prokaryotic type
rRNA helicases
CGLAU_05060 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Motif
Other DBs
NCBI-ProteinID:
AQQ14986
UniProt:
A0A1Q2HVV0
LinkDB
All DBs
Position
1007592..1009664
Genome browser
AA seq
690 aa
AA seq
DB search
MNISENATGGENEPDVNMSENQETPQDVVAESAAGEDTRDAGDADETGAAEKLETAATET
ETEAAAEPEAVYPFAELGLPERVVDAVKQVGFEKPSPIQAQTIPHLMEGRDVVGLAQTGT
GKTAAFALPVLSQIDTGARHPQALVLAPTRELALQVSDSFQSFADHLGGVSILPIYGGQA
YGIQLSGLRRGAQVIVGTPGRVIDHLEKGSLDISNLRFLVLDEADEMLNMGFQEDVERIL
EDTPDEKQVALFSATMPNAIRRISRDYLNDPVEVTVKSETRTNTNITQRYLYTAHRNKLD
AITRILEVTDFEAMIVFVRTKHETEEVAEQLRDRGFSAAAINGDIPQAQRERTVDQLRDG
RLDILVATDVAARGLDVERISHVLNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRER
RMLRSIERVTNAKIEEMDLPTVDEVNEARKGKFMDSITGSLEASQLDVFKQMVRDYSAAN
NVAMDDIAAALAIQAQSGDEFFMKEPPKDKRDRRDRERGGRGRDRFDREDRGGRRRDRDD
RGGRGRFEHSDNENFDTYRLDVGKRQHVRPGAIVGAIANEGGLSAKDFGRITIGSDFTLV
ELPKGLDKGVLNRLEDTRISGQLINIQRDHGAPPRDRGGRGRGDRGGFRGGRDRDDRGGR
GGYNRDRDRDRDRGGRGGDRGGRGGRWDRD
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttccgaaaacgccaccggcggcgagaacgagccggacgtgaacatgtcggaa
aatcaggaaaccccgcaggatgtcgtggccgaatcggccgcaggtgaggacaccagggat
gcgggagatgctgatgagaccggcgctgcggagaaattagaaaccgcggccaccgaaact
gaaactgaagcagcagctgaacctgaggctgtgtacccgttcgccgagctgggcctgccc
gagcgcgtggtggacgcggtgaagcaagtgggctttgagaagccgtcgccgattcaggca
cagacgattccgcacctgatggaaggccgcgacgtggttggccttgcgcagacgggtacg
ggtaagacggcggcgtttgcgttgccggtgctctcgcaaatcgacaccggtgcgcgccac
ccgcaggcgcttgtgctggcgccgactcgtgagctggcgctgcaggtgtctgattctttc
cagtcgtttgcagaccacctgggcggggtgtcgatcctgccgatctacggtggccaggcg
tacgggattcagctttctggcctgcgccgcggcgcgcaggtgatcgtgggtacgccgggc
cgcgtgatcgaccacctggagaagggctcgctggacatttccaacctgcgcttcctggtg
ctggacgaggccgacgagatgctgaacatgggcttccaggaagacgtggagcgcatcctc
gaggacacgcctgatgagaagcaggtggcgctgttctcggcgacgatgccgaacgcgatc
cgccgcatctcgcgcgactacctcaacgacccggttgaggtgacggtgaagagcgagacc
cgcaccaacaccaacatcacgcagcgttacctgtacacggcgcaccgcaacaagctggac
gcgatcacgcgcatccttgaagtcaccgacttcgaggcaatgatcgtgtttgtgcgcacc
aagcacgagacagaagaggttgcggagcagctgcgcgaccgcgggttctctgccgccgcg
atcaacggcgatattccgcaggcgcagcgtgagcgcacagtggatcagcttcgcgacggc
cggttggacatcttggtagctaccgacgtcgccgcgcgtggtttggatgtggagcgcatc
agccacgtgctgaactacgacattccgaacgacaccgagtcttatgtgcaccgcattggc
cgtactggtcgtgctggtcgtactggtgaggcgattctgtttgtcaccccgcgtgagcgt
cgcatgctgcgctctattgagcgcgtgaccaacgcgaagatcgaagagatggatctgccg
accgtcgatgaggtcaacgaggcgcgcaagggcaagttcatggactcgattacgggttca
cttgaggcgtcccagctggacgtgttcaagcagatggtgcgcgattactctgcggccaac
aacgtggcgatggacgacatcgcagccgcgctggcgatccaggcgcagtccggcgacgag
ttcttcatgaaggagccgccgaaagacaagcgcgatcgacgcgaccgtgagcgcggcggg
cgtgggcgtgaccgcttcgaccgcgaagaccgtggcgggcgcagacgtgaccgtgatgat
cgcggcggacgcgggcgtttcgagcacagcgacaacgagaactttgacacctaccgcctt
gacgtgggcaagcgccagcacgtgcgcccgggtgccattgtcggtgcgattgccaacgag
ggtggtttgagcgcgaaggacttcggtcgcatcaccatcggcagcgacttcacgctggta
gagctgccgaagggcttggacaagggcgtgctgaatcgcctcgaagacacccgcatttcc
ggtcagctgatcaacattcagcgcgaccacggtgcgccgccgcgcgatcggggcggacgt
ggacgcggtgatcgtggcgggttccgcggcggacgcgaccgcgacgatcgtggtggccgc
ggcggctacaaccgcgaccgtgatcgtgaccgtgatcgcggcggccgaggcggggaccgc
ggcggccgtggtggccgctgggaccgcgactaa
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